Thanks for the suggestion. I have figured (by googling around and comparing the
content of asm directories) that Ubuntu 11.04 has some difference in the
location of /usr/include/asm/. It appears that now that whole directory is
located at /usr/include/x86_64-linux-gnu/asm/.
I tried to use -I but it did not work. Making a symbolic link
ln -s /usr/include/x86_64-linux-gnu/asm /usr/include/asm
did help to move things forward.
But now I got another issue. After compiling for a while it gives me the
following error:
make[7]: Entering directory
`/home2/bubin/Software/openmpi-1.4.3/ompi/contrib/vt/vt/tools/opari/tool'
icpc -DHAVE_CONFIG_H -I. -I../../.. -O3 -DNDEBUG -finline-functions
-pthread -MT handler.o -MD -MP -MF .deps/handler.Tpo -c -o handler.o handler.cc
mv -f .deps/handler.Tpo .deps/handler.Po
icpc -DHAVE_CONFIG_H -I. -I../../.. -O3 -DNDEBUG -finline-functions
-pthread -MT ompragma.o -MD -MP -MF .deps/ompragma.Tpo -c -o ompragma.o
ompragma.cc
mv -f .deps/ompragma.Tpo .deps/ompragma.Po
icpc -DHAVE_CONFIG_H -I. -I../../.. -O3 -DNDEBUG -finline-functions
-pthread -MT ompragma_c.o -MD -MP -MF .deps/ompragma_c.Tpo -c -o ompragma_c.o
ompragma_c.cc
/usr/include/c++/4.5/iomanip(64): error: expected an expression
{ return { __mask }; }
^
/usr/include/c++/4.5/iomanip(94): error: expected an expression
{ return { __mask }; }
^
/usr/include/c++/4.5/iomanip(125): error: expected an expression
{ return { __base }; }
^
/usr/include/c++/4.5/iomanip(193): error: expected an expression
{ return { __n }; }
^
/usr/include/c++/4.5/iomanip(223): error: expected an expression
{ return { __n }; }
^
/usr/include/c++/4.5/iomanip(163): error: expected an expression
{ return { __c }; }
^
compilation aborted for ompragma_c.cc (code 2)
make[7]: *** [ompragma_c.o] Error 2
make[7]: Leaving directory
`/home2/bubin/Software/openmpi-1.4.3/ompi/contrib/vt/vt/tools/opari/tool'
make[6]: *** [all-recursive] Error 1
make[6]: Leaving directory
`/home2/bubin/Software/openmpi-1.4.3/ompi/contrib/vt/vt/tools/opari'
make[5]: *** [all-recursive] Error 1
make[5]: Leaving directory
`/home2/bubin/Software/openmpi-1.4.3/ompi/contrib/vt/vt/tools'
make[4]: *** [all-recursive] Error 1
make[4]: Leaving directory
`/home2/bubin/Software/openmpi-1.4.3/ompi/contrib/vt/vt'
make[3]: *** [all] Error 2
make[3]: Leaving directory
`/home2/bubin/Software/openmpi-1.4.3/ompi/contrib/vt/vt'
make[2]: *** [all-recursive] Error 1
make[2]: Leaving directory `/home2/bubin/Software/openmpi-1.4.3/ompi/contrib/vt'
make[1]: *** [all-recursive] Error 1
make[1]: Leaving directory `/home2/bubin/Software/openmpi-1.4.3/ompi'
make: *** [all-recursive] Error 1
I am not sure how to deal with that. Any advice is appreciated.
Sergiy
----------------------------------------
> From: r...@open-mpi.org
> Date: Tue, 19 Apr 2011 11:35:48 -0600
> To: us...@open-mpi.org
> Subject: Re: [OMPI users] Problem compiling OpenMPI on Ubuntu 11.04
>
> Nothing was attached, but I doubt they would help anyway. This looks like a
> missing header file in Ubuntu, or else one that got moved and needs a
> different path.
>
> Where is asm/errno.h, and how was it included in /usr/include/linux/errno.h?
> Best I can figure is it got put in some non-standard place, and you'll need
> to add a -I to your CPPFLAGS to find it.
>
>
> On Apr 19, 2011, at 10:52 AM, Sergiy Bubin wrote:
>
> >
> > Hi all,
> >
> > I am trying to compile OpenMPI 1.4.3 with Intel compilers (version 12.0
> > update 2) on my new computer (Ubuntu 11.04 beta2). While running
> > ./configure script seems to be fine, make all generates an error almost at
> > the very beginning (see the attached output_make_all.txt file). For
> > completeness I am also attaching configure.log file.
> >
> > I am not sure what that error means:
> >
> > make[3]: Entering directory
> > `/home2/bubin/Software/openmpi-1.4.3/opal/libltdl'
> > /bin/bash ./libtool --tag=CC --mode=compile icc -DHAVE_CONFIG_H -I.
> > -DLT_CONFIG_H='' -DLTDL -I. -I. -Ilibltdl -I./libltdl -I./libltdl -O3
> > -DNDEBUG -fvisibility=hidden -MT dlopen.lo -MD -MP -MF .deps/dlopen.Tpo -c
> > -o dlopen.lo `test -f 'loaders/dlopen.c' || echo './'`loaders/dlopen.c
> > libtool: compile: icc -DHAVE_CONFIG_H -I. "-DLT_CONFIG_H=" -DLTDL -I. -I.
> > -Ilibltdl -I./libltdl -I./libltdl -O3 -DNDEBUG -fvisibility=hidden -MT
> > dlopen.lo -MD -MP -MF .deps/dlopen.Tpo -c loaders/dlopen.c -fPIC -DPIC -o
> > .libs/dlopen.o
> > /usr/include/linux/errno.h(4): catastrophic error: cannot open source file
> > "asm/errno.h"
> > #include
> >
> > I have just tried to compile the same version of OpenMPI with Intel 12.0 on
> > another machine running Ubuntu 9.10 and it went just fine. Also, I recently
> > did it on two other systems running Ubuntu 10.04 and 10.10. Again, no
> > problems we encountered. If anyone could shed some light on my issue that
> > would be very much appreciated.
> >
> > Thanks,
> > Sergiy
> >
> >
> > _______________________________________________
> > users mailing list
> > us...@open-mpi.org
> > http://www.open-mpi.org/mailman/listinfo.cgi/users
>
>
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