Re: [OMPI users] OPEN MPI error

2013-09-18 Thread Gus Correa
Hi justa tester tester Is your p2p1 interface an Infiniband port, or is it Ethernet? If it is Ethernet, try removing "--mca btl_openib_if_include p2p1" from your mpiexec command line, because it would conflict with the other mca parameter you chose "--mca btl openib,sm,self". Simpler may be bett

Re: [OMPI users] open-mpi error

2011-11-26 Thread Ralph Castain
I see you are running this via "sudo". Unfortunately, that has a peculiar behavior - it resets the environmental variables to something appropriate for root. So I suspect that the library path is not correct as far as mpirun is concerned. You can check it easily enough - just do "sudo printenv"

Re: [OMPI users] open-mpi error

2011-11-26 Thread Markus Stiller
Hi Castain, You have some major problems with confused installations of MPIs. First, you cannot compile an application against>MPICH and expect to run it with OMPI - the two are not binary compatible. You need to compile against the MPI>installation you intend to run against. I did this, sr

Re: [OMPI users] open-mpi error

2011-11-24 Thread Ralph Castain
Hi Markus You have some major problems with confused installations of MPIs. First, you cannot compile an application against MPICH and expect to run it with OMPI - the two are not binary compatible. You need to compile against the MPI installation you intend to run against. Second, your errors

Re: [OMPI users] open-mpi error

2011-11-24 Thread Markus Stiller
On 11/24/2011 10:08 PM, MM wrote: Hi I get the same error while linking against home built 1.5.4 openmpi libs on win32. I didn't get this error against the prebuilt libs. I see you use Suse. There probably is a openmpi.rpm or openmpi.dpkg already available for Suse which contains the libraries

Re: [OMPI users] open-mpi error

2011-11-24 Thread Markus Stiller
On 11/24/2011 10:08 PM, MM wrote: Hi I get the same error while linking against home built 1.5.4 openmpi libs on win32. I didn't get this error against the prebuilt libs. I see you use Suse. There probably is a openmpi.rpm or openmpi.dpkg already available for Suse which contains the libraries

Re: [OMPI users] open-mpi error

2011-11-24 Thread MM
Hi I get the same error while linking against home built 1.5.4 openmpi libs on win32. I didn't get this error against the prebuilt libs. I see you use Suse. There probably is a openmpi.rpm or openmpi.dpkg already available for Suse which contains the libraries and you could link against those and

Re: [OMPI users] Open MPI error to define MPI_Datatype in header file

2011-10-10 Thread Jeff Squyres
You'll need to be a bit more specific. What describe should work fine. foo.h: extern MPI_Datatype mydtype; foo.cc: #inlclude "foo.h" MPI_Datatype mydtype; bar.cc: #include "foo.h" void bogus(void) { MPI_Datatype foo = mydtype; } On Oct 9, 2011, at 4:10 PM, Jack Bryan wrote: > Hi, > > I nee

Re: [OMPI users] Open MPI error MPI_ERR_TRUNCATE: message truncated

2010-07-08 Thread jody
it ? > Any help is appreciated. > thanks > Jack > july 7  2010 > > > From: solarbik...@gmail.com > Date: Wed, 7 Jul 2010 17:32:27 -0700 > To: us...@open-mpi.org > Subject: Re: [OMPI users] Open MPI error MPI_ERR_TRUNCATE: message trunca

Re: [OMPI users] Open MPI error MPI_ERR_TRUNCATE: message truncated

2010-07-07 Thread Jack Bryan
iated. thanks Jack july 7 2010 From: solarbik...@gmail.com List-Post: users@lists.open-mpi.org Date: Wed, 7 Jul 2010 17:32:27 -0700 To: us...@open-mpi.org Subject: Re: [OMPI users] Open MPI error MPI_ERR_TRUNCATE: message truncated This error typically occurs when the received message is bigger tha

Re: [OMPI users] Open MPI error MPI_ERR_TRUNCATE: message truncated

2010-07-07 Thread David Zhang
This error typically occurs when the received message is bigger than the specified buffer size. You need to narrow your code down to offending receive command to see if this is indeed the case. On Wed, Jul 7, 2010 at 8:42 AM, Jack Bryan wrote: > Dear All: > > I need to transfer some messages f

Re: [OMPI users] open-mpi error: unable to create listen socket

2009-03-17 Thread -andria-
Thank you Ralph, I found the problem. it is because I wrongly configured the second node's selinux property (which is set to be enforced). After it is disabled, the parallel-hello works fine. regards, -andria On Tue, Mar 17, 2009 at 8:08 PM, Ralph Castain wrote: > Hi Andria > > The problem is

Re: [OMPI users] open-mpi error: unable to create listen socket

2009-03-17 Thread Ralph Castain
Hi Andria The problem is a permissions one - your system has been setup so that only root has permission to open a TCP socket. I don't know what system you are running - you might want to talk to your system admin or someone knowledgeable on that operating system to ask them how to revise

Re: [OMPI users] Open MPI error

2009-02-03 Thread Jeff Squyres
Have you tried this: http://www.open-mpi.org/faq/?category=openfabrics#v1.2-use-early-completion On Feb 2, 2009, at 2:52 PM, c.j@exxonmobil.com wrote: I am using openmpi to run a job on 4 nodes, 2 processors per node. Seems like 5 out of the 8 processors executed the app successfu

Re: [OMPI users] Open MPI error when using MPI_Comm_spawn

2007-04-04 Thread Ralph H Castain
Hi Prakash I can't really test this solution as the Torque dynamic host allocator appears to be something you are adding to that system (so it isn't part of the released code). However, the attached code should cleanly add any nodes to any existing allocation known to OpenRTE. I hope to resume wo

Re: [OMPI users] Open MPI error when using MPI_Comm_spawn

2007-04-03 Thread Jeff Squyres
On Apr 2, 2007, at 12:53 PM, Prakash Velayutham wrote: prakash@wins04:~/thesis/CS/Samples>mpirun -np 4 --bynode --hostfile machinefile ./parallel.laplace [wins01:17699] *** An error occurred in MPI_Comm_spawn [wins01:17699] *** on communicator MPI_COMM_WORLD [wins01:17699] *** MPI_ERR_ARG: in

Re: [OMPI users] Open MPI error when using MPI_Comm_spawn

2007-04-02 Thread Prakash Velayutham
Thanks Ralph. I will wait for your Torque dynamic host addition solution. Prakash >>> r...@lanl.gov 04/02/07 1:00 PM >>> Hi Prakash This is telling you that you have an error in the comm_spawn command itself. I am no expert there, so I'll have to let someone else identify it for you. There are

Re: [OMPI users] Open MPI error when using MPI_Comm_spawn

2007-04-02 Thread Ralph Castain
Hi Prakash This is telling you that you have an error in the comm_spawn command itself. I am no expert there, so I'll have to let someone else identify it for you. There are no limits to launching on nodes in a hostfile - they are all automatically considered "allocated" when the file is read. If

Re: [OMPI users] Open MPI error when using MPI_Comm_spawn

2007-04-02 Thread Prakash Velayutham
Hello, Thanks for the patch. I still do not know the internals of Open MPI, so can't test this right away. But here is another test I ran and that failed too. I have now removed Torque from the equation. I am NOT requesting nodes through Torque. I SSH to a compute node and start up the code as

Re: [OMPI users] Open MPI error when using MPI_Comm_spawn

2007-04-02 Thread Ralph Castain
No offense, but I would definitely advise against that path. There are other, much simpler solutions to dynamically add hosts. We *do* allow dynamic allocation changes - you just have to know how to do them. Nobody asked before... ;-) Future variations will include an even simpler, single API sol

Re: [OMPI users] Open MPI error when using MPI_Comm_spawn

2007-04-02 Thread Jeremy Buisson
Ralph Castain a écrit : > The runtime underneath Open MPI (called OpenRTE) will not allow you to spawn > processes on nodes outside of your allocation. This is for several reasons, > but primarily because (a) we only know about the nodes that were allocated, > so we have no idea how to spawn a proc

Re: [OMPI users] Open MPI error when using MPI_Comm_spawn

2007-04-02 Thread Prakash Velayutham
Thanks for the info, Ralph. It is as I thought, but was hoping wouldn't be that way. I am requesting more nodes from the resource manager from inside of my application code using the RM's API. when I know they are available (allocated by the RM), I am trying to split the application data across the

Re: [OMPI users] Open MPI error when using MPI_Comm_spawn

2007-04-02 Thread Ralph Castain
The runtime underneath Open MPI (called OpenRTE) will not allow you to spawn processes on nodes outside of your allocation. This is for several reasons, but primarily because (a) we only know about the nodes that were allocated, so we have no idea how to spawn a process anywhere else, and (b) most

Re: [OMPI users] Open MPI error

2006-04-14 Thread Prakash Velayutham
OK. Figured that it was wrong number of arguments to the code. Thanks, Prakash Jeff Squyres (jsquyres) wrote: I'm assuming that this is during the startup shortly after mpirun, right? (i.e., during MPI_INIT) It looks like MPI processes were unable to connect back to the rendezvous point (mpir

Re: [OMPI users] Open MPI error

2006-04-14 Thread Jeff Squyres (jsquyres)
I'm assuming that this is during the startup shortly after mpirun, right? (i.e., during MPI_INIT) It looks like MPI processes were unable to connect back to the rendezvous point (mpirun) during startup. Do you have any firewalls or port blocking running in your cluster? > -Original Message