Re: [OMPI users] [EXTERNAL] Re: MPI_Init_thread error

2023-07-26 Thread Aziz Ogutlu via users
Hi John, We're using software on HPC system, because of that I have to compile it from zero. On 7/26/23 17:16, John Hearns wrote: Another idiot question... Is there a Pack or Easy build recipe for this software? Should help you get it built. On Wed, 26 Jul 2023, 10:27 Aziz Ogutlu via users,

Re: [OMPI users] [EXTERNAL] Re: MPI_Init_thread error

2023-07-26 Thread John Hearns via users
Another idiot question... Is there a Pack or Easy build recipe for this software? Should help you get it built. On Wed, 26 Jul 2023, 10:27 Aziz Ogutlu via users, wrote: > Hi Howard, > > I'm using with salloc+mpirun command that explained on faq page that you > send, this time I'm getting error b

Re: [OMPI users] [EXTERNAL] Re: MPI_Init_thread error

2023-07-26 Thread Aziz Ogutlu via users
Hi Howard, I'm using with salloc+mpirun command that explained on faq page that you send, this time I'm getting error below: Caught signal 11 (Segmentation fault: address not mapped to object at address 0x30) On 7/25/23 19:34, Pritchard Jr., Howard wrote: HI Aziz, Oh I see you referenced

Re: [OMPI users] [EXTERNAL] Re: MPI_Init_thread error

2023-07-26 Thread Aziz Ogutlu via users
Hi John, There is no missing libraries for SU2_CFD. On 7/26/23 10:13, John Hearns via users wrote: Very stupid question from me...  I see you do a module load su2 Is it necessary to load the module for openmpi? Run  'ldd /SU2_CFD' /and look to see if there are missing libraries. Apologies if t

Re: [OMPI users] [EXTERNAL] Re: MPI_Init_thread error

2023-07-26 Thread Aziz Ogutlu via users
Hi Howard, I tried to compile OpenMPI 4.1.5. When I looked configure script's help page there was no --with-pmi2 parameter. On 7/25/23 18:01, Pritchard Jr., Howard wrote: HI Aziz, Did you include –with-pmi2 on your Open MPI configure line? Howard *From: *users on behalf of Aziz Ogutlu

Re: [OMPI users] [EXTERNAL] Re: MPI_Init_thread error

2023-07-26 Thread John Hearns via users
Very stupid question from me... I see you do a module load su2 Is it necessary to load the module for openmpi? Run 'ldd *SU2_CFD' * and look to see if there are missing libraries. Apologies if this is a nonsense question. On Tue, 25 Jul 2023 at 18:00, Pritchard Jr., Howard via users < users@lis

Re: [OMPI users] [EXTERNAL] Re: MPI_Init_thread error

2023-07-25 Thread Pritchard Jr., Howard via users
HI Aziz, Oh I see you referenced the faq. That section of the faq is discussing how to make the Open MPI 4 series (and older) job launcher “know” about the batch scheduler you are using. The relevant section for launching with srun is covered by this faq - https://www-lb.open-mpi.org/faq/?cat

Re: [OMPI users] [EXTERNAL] Re: MPI_Init_thread error

2023-07-25 Thread Pritchard Jr., Howard via users
HI Aziz, Did you include –with-pmi2 on your Open MPI configure line? Howard From: users on behalf of Aziz Ogutlu via users Organization: Eduline Bilisim Reply-To: Open MPI Users Date: Tuesday, July 25, 2023 at 8:18 AM To: Open MPI Users Cc: Aziz Ogutlu Subject: [EXTERNAL] Re: [OMPI users]