Am 27.04.2010 um 16:57 schrieb Edmund Sumbar:
On Tue, 27 Apr 2010, Frederik Himpe wrote:
OpenMPI is installed in its own prefix
(/shared/apps/openmpi/gcc-4.4/1.4.1), and can be loaded by the
environment module (http://modules.sourceforge.net/) openmpi.
Now I can successfully run this pe job:
On Tue, 27 Apr 2010, Frederik Himpe wrote:
OpenMPI is installed in its own prefix
(/shared/apps/openmpi/gcc-4.4/1.4.1), and can be loaded by the
environment module (http://modules.sourceforge.net/) openmpi.
Now I can successfully run this pe job:
#!/bin/bash
#$ -N test
#$ -q all.q
#$ -pe openm
Frederik Himpe writes:
> bash: module: line 1: syntax error: unexpected end of file
> bash: error importing function definition for `module'
It's nothing to do with open-mpi -- the job hasn't even started
executing at that point. Consult the archives of the SGE users list and
the issue tracker.
On Tue, 2010-04-27 at 07:52 -0600, Ralph Castain wrote:
> Looks to me like you have an error in the openmpi module file...
I cannot trigger this error by running module add openmpi/gcc-4.4, so I
don't have the feeling the module file in itself is erroneous.
Just in case, this is what it looks lik
Looks to me like you have an error in the openmpi module file...
On Apr 27, 2010, at 6:38 AM, Frederik Himpe wrote:
> I'm using SGE 6.1 and OpenMPI 1.4.1 built with gridengine support.
>
> I've got this parallel environment defined in SGE:
>
> pe_name openmpi
> slots 100
>
I'm using SGE 6.1 and OpenMPI 1.4.1 built with gridengine support.
I've got this parallel environment defined in SGE:
pe_name openmpi
slots 100
user_listsNONE
xuser_lists NONE
start_proc_args /bin/true
stop_proc_args/bin/true
allocation_rule $fill_up
co
