Thanks. This is obviously (now) a problem with my gcc build which isn't
appropriate for this list. I'll re-visit this and post a solution once I've
(hopefully) got this working. I don't have any shared libraries (*.so.*) in my
gcc tree so something went badly wrong ...
Thanks for your help.
--
My gcc 4.7.2 build appears to be ignoring the one in /usr/lib64 and using the
one in its own install tree:
/usr/projects/hpcsoft/moonlight/gcc/4.7.2/lib64/libgfortran.so.3
-david
--
David Gunter
HPC-3: Infrastructure Team
Los Alamos National Laboratory
On Dec 6, 2012, at 2:50 PM, Paul Hatton
Eric,
You are correct, our builds do not show lustre support:
MCA io: information "io_romio_user_configure_params" (value: , data
source: default value)
So to enable this, when I build OpenMPI I should pass:
--with-io-romio-flags='--with-file-system=testfs+ufs+nfs+lustre'
We have Lustre, loc
Ahh, it's looking in /usr/lib64 and finding libgfortran.so.3 which is older
than the one expected by gcc 4.7 (system gcc is 4.4.6). Looking at my gcc
installation I don't have any shared libraries in there, just static ones.
David - if you don't mind a slight diversion, where is your libgfortran
Mine was with a non-default-location gcc-4.7.2 as well.
$which gfortran
/usr/projects/hpcsoft/moonlight/gcc/4.7.2/bin/gfortran
$ gfortran --version
GNU Fortran (GCC) 4.7.2
Copyright (C) 2012 Free Software Foundation, Inc.
GNU Fortran comes with NO WARRANTY, to the extent permitted by law.
You may
It looks like your gfortran compiler is broken...?
configure:53489: checking Fortran 90 kind of MPI_INTEGER_KIND
(selected_int_kind(9))
configure:53507: gfortran -o conftest conftestf.f90
configure:53514: $? = 0
configure:53554: ./conftest
./conftest: /usr/lib64/libgfortran.so.3: version `GFO
failed one attached.
--
Paul Hatton
High Performance Computing and Visualisation Specialist
IT Services, The University of Birmingham
Ph: 0121-414-3994 Mob: 07785-977340 Skype: P.S.Hatton
[Service Manager, Birmingham Environment for Academic Research]
[Also Technical Director, IBM Visual and Sp
Oh, sorry - I tried a build with the system gcc and it worked. I'll repeat the
failed one and get it to you. Sorry about that.
--
Paul Hatton
High Performance Computing and Visualisation Specialist
IT Services, The University of Birmingham
Ph: 0121-414-3994 Mob: 07785-977340 Skype: P.S.Hatton
Thanks. Is this with gcc in the default location (/usr/bin/gcc) or elsewhere?
It may not be relevant, but I built v4.7.2 and installed it outside of the
system area:
[appmaint@bb2login04 openmpi-1.6.3]$ which gcc
/gpfs/apps/gcc/v4.7.2/bin/gcc
[appmaint@bb2login04 openmpi-1.6.3]$ gcc -v
Using bui
This does not appear to be the right config.log -- the test in question passed:
configure:53489: checking Fortran 90 kind of MPI_INTEGER_KIND
(selected_int_kind(9))
configure:53507: gfortran -o conftest conftestf.f90
configure:53514: $? = 0
On Dec 6, 2012, at 1:11 PM, Paul Hatton wrote:
>
Thanks. zip-ed config.log attached
--
Paul Hatton
High Performance Computing and Visualisation Specialist
IT Services, The University of Birmingham
Ph: 0121-414-3994 Mob: 07785-977340 Skype: P.S.Hatton
[Service Manager, Birmingham Environment for Academic Research]
[Also Technical Director, IBM
I just tried with the following:
$ gcc --version
gcc (GCC) 4.7.2
Copyright (C) 2012 Free Software Foundation, Inc.
This is free software; see the source for copying conditions. There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
$ ./configure --prefix=/tmp/do
I have not tested with gfortran 4.7.2.
Can you send the config.log file? (please compress)
On Dec 6, 2012, at 12:42 PM, Paul Hatton wrote:
> I've searched the FAQ but not come up with anything about this ... with
> OpenMPI 1.6.3 and gcc 4.7.2, when I
>
> ./configure --prefix=/gpfs/apps/openm
I've searched the FAQ but not come up with anything about this ... with OpenMPI
1.6.3 and gcc 4.7.2, when I
./configure --prefix=/gpfs/apps/openmpi/1.6.3/gcc_4.7.2-tm-ib \
F77=gfortran FC=gfortran CC=gcc CXX=c++ \
--with-tm=/gpfs/sysapps/torque/4.1.2 \
--with-openib \
2>&1|tee ../logs/co
So far, I count three people interested in OpenMPI on Windows. That's
not a case for ongoing support.
Damien
On 04/12/2012 11:32 AM, Durga Choudhury wrote:
All
Since I did not see any Microsoft/other 'official' folks pick up the
ball, let me step up. I have been lurking in this list for quit
What does it means ???
Joseph,
Indeed, there was a problem in the MXM rpm.
The fixed MXM has been published at the same location:
http://mellanox.com/downloads/hpc/mxm/v1.1/mxm-latest.tar
-- YK
On 12/4/2012 9:20 AM, Joseph Farran wrote:
> Hi Mike.
>
> Removed the old mxm, downloaded and installed:
>
> /tmp/mxm/v
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