Re: [sage-support] Problem with lovasz theta number of a graph

2016-05-12 Thread Sihuang Hu
I installed sage 7.1 from source codes, and now it works perfectly. Thanks very much! 在 2016年5月12日星期四 UTC+3上午11:14:38,Sihuang Hu写道: > > It shows: > shhu-ee-tau ~: ldd ~/Documents/SageMath/local/lib/libsdp.so.0 > linux-vdso.so.1 => (0x7ffdeb3b) > liblapack.so.3 => > /home/shhu/Doc

Re: [sage-support] Problem with lovasz theta number of a graph

2016-05-12 Thread Sihuang Hu
It shows: shhu-ee-tau ~: ldd ~/Documents/SageMath/local/lib/libsdp.so.0 linux-vdso.so.1 => (0x7ffdeb3b) liblapack.so.3 => /home/shhu/Documents/SageMath/local/lib/liblapack.so.3 (0x7fea93a69000) libcblas.so.3 => /home/shhu/Documents/SageMath/local/lib/libcblas.so.3 (0x

Re: [sage-support] Problem with lovasz theta number of a graph

2016-05-12 Thread Dima Pasechnik
and what does 'ldd /home/shhu/Documents/SageMath/local/lib/libsdp.so.0' say? On Wednesday, May 11, 2016 at 2:43:04 PM UTC+1, Dima Pasechnik wrote: > > It does work on some graphs, still, right? > It's a high-end relatively new CPU, perhaps Atlas and/or gcc has a problem > with it? > > Can you pos

Re: [sage-support] Problem with lovasz theta number of a graph

2016-05-11 Thread Dima Pasechnik
On Wednesday, May 11, 2016 at 6:10:52 PM UTC+1, Sihuang Hu wrote: > > I think I downloaded the binaries. Thanks for your suggestions. I will try > it. > well, you might try Sage 7.1 binary, perhaps it would work better... (or build from source, on such a machine it won't take much time, perhaps

Re: [sage-support] Problem with lovasz theta number of a graph

2016-05-11 Thread Sihuang Hu
I think I downloaded the binaries. Thanks for your suggestions. I will try it. 在 2016年5月11日星期三 UTC+3下午6:14:37,Dima Pasechnik写道: > > Have you built Sage from source? If not, it could happen, in principle, > that lapack/atlas/blas shipped > do not quite work on your system... > > If you built it

Re: [sage-support] Problem with lovasz theta number of a graph

2016-05-11 Thread Dima Pasechnik
Have you built Sage from source? If not, it could happen, in principle, that lapack/atlas/blas shipped do not quite work on your system... If you built it from source, did you do anything special to build Atlas in particular? You can also try building csdp completely separately from Sage, usin

Re: [sage-support] Problem with lovasz theta number of a graph

2016-05-11 Thread Sihuang Hu
Yes, it still works on many other graphs. --- (sage-sh) shhu@shhu-ee-tau:~$ ldd `which theta` linux-vdso.so.1 => (0x7ffea69d6000) libsdp.so.0 => /home/shhu/Documents/

Re: [sage-support] Problem with lovasz theta number of a graph

2016-05-11 Thread Dima Pasechnik
It does work on some graphs, still, right? It's a high-end relatively new CPU, perhaps Atlas and/or gcc has a problem with it? Can you post the output of 'ldd theta', i.e. (sage-sh) dimpase@clpc171:sage$ ldd `which theta` linux-vdso.so.1 (0x7ffd2c34f000) libsdp.so.0 => /home/scratch/dimpase/

Re: [sage-support] Problem with lovasz theta number of a graph

2016-05-11 Thread Sihuang Hu
My Cpu information is attached... 在 2016年5月11日星期三 UTC+3下午2:58:43,Sihuang Hu写道: > > I just did what you suggested, and it didn't work. I got those messages: > > (sage-sh) shhu@shhu-ee-tau:~$ theta 2k2 > Segmentation fault (core dumped) > > My Cpu information is attached. > Ubuntu 14.04LTS > SageMa

Re: [sage-support] Problem with lovasz theta number of a graph

2016-05-11 Thread Sihuang Hu
I just did what you suggested, and it didn't work. I got those messages: (sage-sh) shhu@shhu-ee-tau:~$ theta 2k2 Segmentation fault (core dumped) My Cpu information is attached. Ubuntu 14.04LTS SageMath Version 7.0, Release Date: 2016-01-19 在 2016年5月10日星期二 UTC+3下午11:55:55,Dima Pasechnik写道: > >

Re: [sage-support] Problem with lovasz theta number of a graph

2016-05-10 Thread Dima Pasechnik
here is the input for theta executable: 4 2 1 2 3 4 (also attached) save it to a file named, say, 2k2, fire up "sage -sh" and run theta 2k2 I get $ theta 2k2 Graph is of size 4 2 C block 1, blocksize, 4 Checking constraint 1 Checking constraint 2 Checking constraint 3 Iter: 0 A

Re: [sage-support] Problem with lovasz theta number of a graph

2016-05-10 Thread Dima Pasechnik
Please edit /home/shhu/Documents/SageMath/local/lib/python2.7/site- packages/sage/graphs/lovasz_theta.py to insert print "output was: ", lines after "lines = subprocess.check_output(...)" remove /home/shhu/Documents/SageMath/local/lib/python2.7/site- packages/sage/graphs/lovasz_theta.pyc and sta

Re: [sage-support] Problem with lovasz theta number of a graph

2016-05-10 Thread Sihuang Hu
$sage -sh Starting subshell with Sage environment variables set. Don't forget to exit when you are done. Beware: * Do not do anything with other copies of Sage on your system. * Do not use this for installing Sage packages using "sage -i" or for running "make" at Sage's root directory. The

Re: [sage-support] Problem with lovasz theta number of a graph

2016-05-10 Thread Dima Pasechnik
and on other graphs either? (e.g. on graphs.CycleGraph(7)) Start sage prompt (sage -sh) and check that you have the program called theta available: $ sage -sh Starting subshell with Sage environment variables set. Don't forget to exit when you are done. Beware: * Do not do anything with other

Re: [sage-support] Problem with lovasz theta number of a graph

2016-05-10 Thread Sihuang Hu
It didn't work for me. :( sage: g=Graph([[0,1],[2,3]]) sage: g.lovasz_theta() --- ValueErrorTraceback (most recent call last) in () > 1 g.lovasz_theta() /home/shhu/Documents/SageMath/local

Re: [sage-support] Problem with lovasz theta number of a graph

2016-05-10 Thread Dima Pasechnik
all this works for me just fine: sage: g=Graph([[0,1],[2,3]]) sage: g.lovasz_theta() 2.0 sage: G = graphs.CycleGraph(7) sage: V = Set(G.vertices()) sage: L = [] sage: for s in V.subsets(): : L.append(G.subgraph(s)) : sage: L[68].lovasz_theta() 2.0 Can you try the following: sag

Re: [sage-support] Problem with lovasz theta number of a graph

2016-05-10 Thread Sihuang Hu
The adjacency matrix of the graph is [0 1 0 0] [1 0 0 0] [0 0 0 1] [0 0 1 0] 在 2016年5月10日星期二 UTC+3下午4:30:06,Dima Pasechnik写道: > > What is your L[68] ? > This is probably something like a graph without edges... > > On Tuesday, May 10, 2016 at 1:53:17 PM UTC+1, Sihuang Hu wrote: >> >> Thanks for t

Re: [sage-support] Problem with lovasz theta number of a graph

2016-05-10 Thread Dima Pasechnik
What is your L[68] ? This is probably something like a graph without edges... On Tuesday, May 10, 2016 at 1:53:17 PM UTC+1, Sihuang Hu wrote: > > Thanks for the comments. > I have installed package 'csdp' before. I got this error after I installed > it. > > 在 2016年5月10日星期二 UTC+3下午3:32:59,vdelecro

Re: [sage-support] Problem with lovasz theta number of a graph

2016-05-10 Thread Sihuang Hu
Thanks for the comments. I have installed package 'csdp' before. I got this error after I installed it. 在 2016年5月10日星期二 UTC+3下午3:32:59,vdelecroix写道: > > The error you get is quite strange. On my computer with sage-7.1 I got > > sage: graphs.CycleGraph(7).lovasz_theta() > Traceback (most recent

Re: [sage-support] Problem with lovasz theta number of a graph

2016-05-10 Thread Vincent Delecroix
The error you get is quite strange. On my computer with sage-7.1 I got sage: graphs.CycleGraph(7).lovasz_theta() Traceback (most recent call last): ... PackageNotFoundError: the package 'csdp' was not found. You can install it by running 'sage -i csdp' in a shell Which is very explicit about w

[sage-support] Problem with lovasz theta number of a graph

2016-05-10 Thread Sihuang Hu
Hi guys, When I try to compute the lovasz theta number of some graph, it says that *ValueError: could not convert string to float: failed.:*G = graphs.CycleGraph(7) V = Set(G.vertices()) L = [] for s in V.subsets(): L.append(G.subgraph(s)) L[68].lovasz_theta() ---