Re: [sage-devel] Build error for sage-6.4.1 in pynac-0.3.2

2015-01-13 Thread Francois Bissey
I have personally mostly eliminated the use of LD_LIBRARY_PATH from my linux cluster in favour of coding runpath in programs and libraries so that it is never an issue (the only exception would be openfoam I think). In the case of gcc, it means changing the specs (as in gcc -dumpspecs) to enfor

Re: [sage-devel] Build error for sage-6.4.1 in pynac-0.3.2

2015-01-13 Thread crookscj02
The compile completed. I have installed it in the "official" location. I will now ask the user to run it through its paces. Thanks for your help Cindy On Tuesday, January 13, 2015 at 11:16:29 AM UTC-6, crook...@gmail.com wrote: > > Thank you. I had forgotten to include the gcc "lib64" dire

Re: [sage-devel] Build error for sage-6.4.1 in pynac-0.3.2

2015-01-13 Thread crookscj02
Thank you. I had forgotten to include the gcc "lib64" directory in my LD_LIBRARY_PATH. I have updated the appropriate module file. I will see what happens next. Cindy On Monday, January 12, 2015 at 5:59:51 PM UTC-6, François wrote: > > It looks like something has gone wrong with LD_LIBRARY_P

Re: [sage-devel] Build error for sage-6.4.1 in pynac-0.3.2

2015-01-12 Thread Francois Bissey
It looks like something has gone wrong with LD_LIBRARY_PATH & co. This means that libstdc++ found when running sage is from older version of gcc than the one used to compile sage. Here you find libstdc++ from the system (gcc-4.3.4 I presume) rather than whatever you used to compile. I assume yo

Re: [sage-devel] Build error for sage-6.4.1 in pynac-0.3.2

2015-01-08 Thread crookscj02
It didn't seem to like just changing the effective group and failed almost immediately trying to build gcc. I have started afresh with hpcapps as the effective group and will see how far I can get. On Thursday, January 8, 2015 at 3:38:28 PM UTC-6, François wrote: > > Nothing to do apart from “m

Re: [sage-devel] Build error for sage-6.4.1 in pynac-0.3.2

2015-01-08 Thread Francois Bissey
Nothing to do apart from “make”. > On 9/01/2015, at 10:21, crooksc...@gmail.com wrote: > > Thank you. I will give it a try. > > Pardon my ignorance, but is there anything I have to do to pick up the "make" > where I left off? Or, do I need to start from the beginning? > > Cindy > > On Thur

Re: [sage-devel] Build error for sage-6.4.1 in pynac-0.3.2

2015-01-08 Thread crookscj02
Thank you. I will give it a try. Pardon my ignorance, but is there anything I have to do to pick up the "make" where I left off? Or, do I need to start from the beginning? Cindy On Thursday, January 8, 2015 at 2:41:12 PM UTC-6, François wrote: > > Not completely sure since the error is abou

Re: [sage-devel] Build error for sage-6.4.1 in pynac-0.3.2

2015-01-08 Thread Francois Bissey
Not completely sure since the error is about the folder’s group permission but that’s worth a try. I am not sure how the “security” stuff has been implemented, it may be that the group is outside a deemed safe range. Hum, this was implemented here: https://github.com/sagemath/sage/blob/master/bui

Re: [sage-devel] Build error for sage-6.4.1 in pynac-0.3.2

2015-01-08 Thread crookscj02
OSorry, I should have said I am NOT part of the root group. I was typing too fast. -- You received this message because you are subscribed to the Google Groups "sage-devel" group. To unsubscribe from this group and stop receiving emails from it, send an email to sage-devel+unsubscr...@googl

Re: [sage-devel] Build error for sage-6.4.1 in pynac-0.3.2

2015-01-08 Thread crookscj02
O > I am part of the root group. Below is the list of groups that I am part > of: > gid=255(hpcadmin) groups=255(hpcadmin),254(hpc),702(techgrp),23171(hpcapps),23173(hpctrain),42124(hpc-vasp),44679(hpc-reems),47919(hpc-sys),61860(rsmadmins) The directories and software that I have mentio

Re: [sage-devel] Build error for sage-6.4.1 in pynac-0.3.2

2015-01-08 Thread Francois Bissey
That’s interesting, would you belong to an admin group or even the root group? Or more likely you set the group ownership and permission for this folder to something that’s not acceptable for the python shipped by sage. François > On 9/01/2015, at 08:43, crooksc...@gmail.com wrote: > > I am tryi