[sage-devel] Help compiling on supercomputer!

Hi all, I just recently received my allocation on the University of Boulder's Research Computing cluster, with the supercomputer JANUS: https://www.rc.colorado.edu/ And so I logged in and compiled sage from source on one of the JANUS compile nodes (6.1.1, downloaded yesterday). I ran make on on

[sage-devel] Help compiling on supercomputer!

Hi all, I just recently received my allocation on the University of Boulder's Research Computing cluster, with the supercomputer JANUS: https://www.rc.colorado.edu/ And so I logged in and compiled sage from source on one of the JANUS compile nodes (6.1.1, downloa

[sage-devel] Re: Sage 3.0.alpha5 released

cord.o weak.o sequence.o charstrg.o debug.o error.o misc.o time.o predtype.o symbol.o lisparit.o i18n.o unixaux.o built.o ari80386.o modules.o libcharset.a /home/kate/sage/sage-3.0.alpha5-x86-Linux/local/ lib/libreadline.so -Wl,-rpath -Wl,/home/kate/sage/sage-3.0.alpha5-x86- Linux/local/lib -lncurse

[sage-devel] Re: Sage 3.0.alpha5 released

Michael, Adding #include to givaro-3.2.10.rc3.p0/src/src/kernel/gmp++/gmp++.h worked. I also have had to add #include to libfplll-2.1.6-20071129.p2/src/src/main.cpp. Now it has failed in clisp-2.41.p13 with [1] + Suspended (tty input) make >& zzz1.4 Kate On Ap

[sage-devel] Re: Sage 3.0.alpha5 released

Michael, When trying to build 3.0.alpha5 using gcc-4.3.0 on x86-Linux (pentium4-fc6), I get the following error in givaro make[5]: Entering directory `/home/kate/sage/sage-3.0.alpha5-x86-Linux/ spkg/build/givaro-3.2.10.rc3.p0/src/src/kernel/gmp++' /bin/sh ../../../libtool --tag=CXX -

[sage-devel] ATLAS developer request

tures, perhaps someone can suggest something? Kate --~--~-~--~~~---~--~~ To post to this group, send email to sage-devel@googlegroups.com To unsubscribe from this group, send email to [EMAIL PROTECTED] For more options, visit this group at http://groups.google.com/group/s

[sage-devel] Suggestion regarding installing optional packages

nd do something else). When I come back, it is unclear to me whether the install has finished. Perhaps something like "install finished" could be added as a last line. Just a suggestion. Kate --~--~-~--~~~---~--~~ To post to this group, send email to

[sage-devel] Re: 2.10.1, itanium-Linux, and graph_generators.py

: 144.7 seconds real2m24.827s user1m38.499s sys 0m2.192s [EMAIL PROTECTED] sage-2.10.1-ia64-Linux]$ On Feb 5, 4:23 pm, "William Stein" <[EMAIL PROTECTED]> wrote: > On Feb 5, 2008 1:18 PM, Kate <[EMAIL PROTECTED]> wrote: > > > > > > > Wh

[sage-devel] 2.10.1, itanium-Linux, and graph_generators.py

180), then when I run 'make check" I get sage -t devel/sage-main/sage/graphs/graph_generators.py [138.8 s] Q1. Since 138.8 < 180, why was the original TIMEOUT not sufficient? Q2. Should I be worried that I had to raise TIMEOUT to 240? Kate --~--~-~--~~-

[sage-devel] sage-2.9.1.txt file in sage-2.10

Is there a good reason why the file 'sage-2.9.1.txt' is at the top-level of sage-2.10? Kate --~--~-~--~~~---~--~~ To post to this group, send email to sage-devel@googlegroups.com To unsubscribe from this group, send email to [EMAIL PROTECTED] For mo

[sage-devel] Re: Sage 2.10.alpha3 released

Michael, This fixes the issue. Thanks! Kate On Jan 16, 11:22 am, mabshoff <[EMAIL PROTECTED] dortmund.de> wrote: > On Jan 16, 5:08 pm, Kate <[EMAIL PROTECTED]> wrote: > > > Michael, > > Hi Kate, > > > The patch for #1790 is ok, but after applying the

[sage-devel] Re: Sage 2.10.alpha3 released

9372]*I, 1)] ** 1 items had failures: 1 of 109 in __main__.example_58 ***Test Failed*** 1 failures. For whitespace errors, see the file .doctest_polynomial_element.pyx [6.6 s] exit code: 256 --

[sage-devel] Re: Sage 2.10.alpha3 released

Michael, sage-2.10.alpha3 fails one test (polynomial_element.pyx) on both x86-Linux (pentium4-fc6) x86_64-Linux (Opteron-fc6) Both were built using gcc-4.2.2 Details follow. Kate ** x86-Linux ** sage -t devel/sage-main/sage/rings/polynomial/ polynomial_element.pyx

[sage-devel] implausibly old time stamp in optional package gap_packages-4.4.10_2.spkg

orry other people - it worried me! - perhaps these files can be 'touched' and the package rebuilt? Kate --~--~-~--~~~---~--~~ To post to this group, send email to sage-devel@googlegroups.com To unsubscribe from this group, send email to [EMAIL

[sage-devel] Re: SAGE 2.10.alpha0 released

you reported there have been resolved. I meant > to ask for confirmation, but I got side tracked over the last couple > days :( Yes, you may close it. flint built ... just did not pass its tests. Kate On Jan 9, 11:23 am, mabshoff <[EMAIL PROTECTED] dortmund.de> wrote: > On Jan 9

[sage-devel] Re: SAGE 2.10.alpha0 released

_fmpz_poly_mul_karatsuba_trunc_left()... ok Testing _fmpz_poly_mul_KS()... GNU MP: Cannot reallocate memory (old_size=8 new_size=4294959128) ./spkg-check: line 51: 11240 Aborted (core dumped) ./ fmpz_poly-test Kate On Jan 7, 9:30 pm, mabshoff <[EMAIL PROTECTED] dortmund.de> wrote: &

[sage-devel] Re: Fwd: [sage-support] sage-2.8.12 build report

File "test.py", line 4: : from cvxopt.base import * Exception raised: Traceback (most recent call last): File "/home/kate/sage/sage-2.8.12-ia64-Linux/local/lib/python2.5/ doctest.py", line 1212, in __run compileflags, 1) in test.globs File &quo

[sage-devel] Re: Fwd: [sage-support] sage-2.8.12 build report

bout this group" to more accurately reflect what you want. Kate On Nov 7, 2:08 pm, "William Stein" <[EMAIL PROTECTED]> wrote: > This should really be sent to sage-devel, so I'm forwarding it there. > > -- Forwarded message -- > From: William S

[sage-devel] Re: Fwd: [sage-support] sage-2.8.12 build report

Michael, I have tried http://sage.math.washington.edu/home/mabshoff/libfplll-2.1-20071024.p0.spkg and can report that it builds on my x86_64-Linux box. The build is now stuck at the cvxopt-0.8.2.p4 spot (same error) that I reported for x86-Linux and ia64-Linux. Kate On Nov 7, 6:16 pm

[sage-devel] Re: sage-2.8.5 on ia64-Linux

Bill, On my ia64-Linux machine, I get the following error with the "-funroll-loops" option. I am using gcc-4.2.1. If I take out that option, things compile fine. make[2]: Entering directory `/home/kate/sage/sage-2.8.5-ia64-Linux/ spkg/build/flint-0.2.p2/src' gcc -std=c99 -I&q

[sage-devel] sage-2.8.5 on ia64-Linux

up-to-date with configure, etc. for this package? (My itanium machine does NOT have the latest autotools installed.) Kate -- Kate Minola University of Maryland, College Park --~--~-~--~~~---~--~~ To post to this group, send email to sage-devel@googlegroups.com To u

[sage-devel] gmp, mpfr, ecm

FYI - the following have recently been released: gmp-4.2.2 mpfr-2.3.0 ecm-6.1.3 Kate -- Kate Minola University of Maryland, College Park --~--~-~--~~~---~--~~ To post to this group, send email to sage-devel@googlegroups.com To unsubscribe from this group

[sage-devel] SAGE and ATLAS

7;ll get a SAGE that is faster at linear algebra. To get SAGE to build using ATLAS, must ATLAS be installed in a "standard" place? If so, what is that place? And what version of ATLAS are you using? -- Kate Minola University of Maryland, College Park --~--~-~--~~---

[sage-devel] 2.7.1 and gcc-2.4.1 linbox problem

built with gcc-4.1.2. -- Kate Minola University of Maryland, College Park --~--~-~--~~~---~--~~ To post to this group, send email to sage-devel@googlegroups.com To unsubscribe from this group, send email to [EMAIL PROTECTED] For more options, visit this group at http

[sage-devel] Re: Bug in sage-test (strip_automount_prefix)?

Michel, > BTW > > My name is Michel and not Michael! Sincere apologies! Kate --~--~-~--~~~---~--~~ To post to this group, send email to sage-devel@googlegroups.com To unsubscribe from this group, send email to [EMAIL PROTECTED] For more options, v

[sage-devel] Re: Bug in sage-test (strip_automount_prefix)?

s "on demand". So for example, on one network I see /u/kate whereas the absolute path is /automount/u/kate By the way, the word "automount" could be anything and is under system administrator control. So strip_automount_prefix() just removes this prefix that os.pa

[sage-devel] Re: Bug in sage-test (strip_automount_prefix)?

Michael, Which thread? Kate On Jun 4, 2:04 pm, Michel <[EMAIL PROTECTED]> wrote: > William already posted a patch to this in another thread! > > On Jun 4, 7:39 pm, Nick Alexander <[EMAIL PROTECTED]> wrote: > > > > PS. Strictly speaking one should

[sage-devel] 2.5.3 and gcc-2.4.0 linbox problem

_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LINBOX_SOLUTIONS_MINPOLY_H=1 -DHAVE_BLAS=1 -I. -I. -I/home/kate/sage/sage-2.5.3-x86_64-Linux-pompey/local/include -fPIC

[sage-devel] linbox build problem on pentium4-Linux and work-around

the build continues successfully. I do not understand why these missing header files do not cause a problem under FC6. -- Kate Minola University of Maryland, College Park --~--~-~--~~~---~--~~ To post to this group, send email to sage-devel@googlegroups.com To

[sage-devel] Re: sage-2.5 build report

Yi, I applied the patch you supplied, but sadly I still get the same errors. Kate On May 11, 11:54 am, Yi Qiang <[EMAIL PROTECTED]> wrote: > Hi Kate, > Can you try applying the follow patch and see if the tests pass now? > You do not need to run make test all over again, the d

[sage-devel] Re: sage-2.5 build report

quot;credits" or "license" for more information. >>> import sys >>> sys.platform 'linux2' >>> Kate On May 10, 5:56 pm, Yi Qiang <[EMAIL PROTECTED]> wrote: > Hi Kate, > Can you please report what sys.platform says on an ia64 machine? &g

[sage-devel] automount problem and patch

When networks use automounting to mount directories upon demand by a user, the absolute full path of a file commonly looks like /tmp_mnt/home/kate//filename /.automount/home/kate/.../filename /.autofs/home/kate/.../filename while all the user normally sees is /home/kate

[sage-devel] sage-2.5 build report

aceback (most recent call last): File "/home/kate/sage/sage-2.5-ia64-Linux/local/lib/python2.5/site-packages/sage/dsage/twisted/pb.py", line 420, in requestAvatar avatar.attached(avatar, mind) File "/home/kate/sage/sage-2.5-ia64-Linux/local/lib/python2.5/site-packages/sag

[sage-devel] Re: SAGE 2.5 and Cygwin (Status Report)

l last): File "setup.py", line 268, in build_image(ext_modules, packages, NUMERIX) File "/home/kate/sage/sage-2.5.rc2-x86-Linux/spkg/build/ matplotlib-0.90.0.p1/setupext.py", line 752, in build_image add_agg_flags(module) File "/home/kate/sage/sage-2.5.rc2-x86-

[sage-devel] Re: sage-2.5.alpha3

*** *** Error: TIMED OUT! *** *** devel/sage-main/sage/schemes/elliptic_curves/ell_generic.py First error message is: File "ell_generic.py", line 220: sage: eqn = symbolic_expression(E); eqn Exception raised: Traceback (most recent call last): File "/home/kat