Hi guys, I'm getting this error below when I try to load the bioconductor
affy library through rpy. It loads find in R though. Its a 64 bit opensuse
system. Any ideas would be greatly appreciated! Paul.
>>> from rpy import r
>>> r('library("affy")')
Loading required package: Biobase
Welcome to Bi
Dear Rpythoners,
I'm having a problem using an R package called 'pvclust' from python. I have
rpy installed and things look like they are fine. The pvclust package loads
fine with r.library('pvclust'), but when I do the following command:
r.pvclust(data, method.hclust="complete", method.dist="cor
It might not be an answer to your exact problem, but it appears to work
with rpy2 (packaged for opensuse).
>>> from ryp2.robjects import r
>>> r.library("affy")
rpy2-2.1.x-dev is introducing a Python package-like approach:
>>> from rpy2.robjects.packages import importr
>>> affy = importr(
On Fri, Sep 11, 2009 at 5:18 PM, Nick Schurch wrote:
> Dear Rpythoners,
>
> I'm having a problem using an R package called 'pvclust' from python. I have
> rpy installed and things look like they are fine. The pvclust package loads
> fine with r.library('pvclust'), but when I do the following comma
