On 9 September 2017 at 11:37, Laurent Gautier wrote:
| Hi,
|
| My recent experience with the list is that my own rare posts were bouncing
| while waiting for moderator's approval. Upon checking what is happening I
| found out a list of messages waiting for approval much longer than what I
| have
On 27 November 2013 at 13:21, Thomas Kluyver wrote:
| On 27 November 2013 12:43, Dirk Eddelbuettel wrote:
|
| So you end up _running_ R. And hence inherit its license.
|
| This is not my project (and I merely look after its integration into
Debian
| and thereby also Ubuntu) but I
nt to make it very clear that tools
like RPy2 (or RInside) cannot be used to circumvent or weaken the R license.
Dirk
--
Dirk Eddelbuettel | e...@debian.org | http://dirk.eddelbuettel.com
--
Rapidly troubleshoot proble
On 27 November 2013 at 09:57, Alan G Isaac wrote:
| On 11/27/2013 8:53 AM, Dirk Eddelbuettel wrote:
| > That the GPL is viral is still a feature and not a bug.
| I understand RPy to target the Python scientific programming community.
Wishing alone does not make the facts go away. RPy / R
t;GPL (>= 2)". I like
the GPL. It means I am assured that noone is profiting from my work without
sharing (code) back. That the GPL is viral is still a feature and not a bug.
Dirk
--
Dirk Eddelbuettel | e...@debian.org | http://dirk.eddelbuettel.com
-
direct answer is: an include file from R has moved, or disappeared. Dirk
| Eddelbuettel has been maintaining the rpy package on debian. Check if there is
| .deb for rpy/R-3.0. If yes, the SVN source for rpy should build. If not, you
| are probably on your own.
Yes, something had come up as R Core
On 3 April 2012 at 15:31, Niek de Klein wrote:
| Hi everyone,
|
| When I do:
|
| import rpy2.robjects as R
| exampleDict = {'colum1':R.IntVector([1,2,3]), 'column2':R.FloatVector([1,2]),
| 'column3':R.FloatVector([1,2,3,4])}
| R.DataFrame(exampleDict)
|
| I get the error that the rows are not o
On 5 June 2011 at 19:28, Laurent Gautier wrote:
| Rpy2-2.2.0 is out. Thanks to everyone for bugs reports, patches.
And in Debian unstable now too.
http://packages.qa.debian.org/r/rpy2.html
Dirk
--
Gauss once played himself in a zero-sum game and won $50.
-- #11 at http:/
On 1 April 2011 at 22:21, Dirk Eddelbuettel wrote:
|
| On 1 April 2011 at 21:52, SourceForge.net wrote:
| | Bugs item #3267989, was opened at 2011-04-02 01:52
| | Message generated for change (Tracker Item Submitted) made by hogartessa
| | You can respond by visiting:
| |
https
self;
| WebMatrix provides all the features you need to develop and
| publish your website. http://p.sf.net/sfu/ms-webmatrix-sf
| ___
| rpy-list mailing list
| rpy-list@lists.sourceforge.net
| https://lists.sourceforge.net/lists/listinfo/rpy-list
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Di
you newer R releases) from CRAN. See
http://cran.r-project.org/bin/linux/ubuntu/
Dirk
--
Dirk Eddelbuettel | e...@debian.org | http://dirk.eddelbuettel.com
--
Special Offer-- Download ArcSight Logger for FREE (a
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On 6 February 2010 at 13:06, Yaroslav Halchenko wrote:
| Hi Laurent and all, all, all,
|
| Does anyone know any RPy2-friendly way to shut R up while I try to load
| libraries? I just want some exception to be through without junk to be
| present on std* ...
|
| here is what I am talking about:
|
On 20 March 2009 at 18:45, Agustin Lobo wrote:
| Hi!
|
| I'm installing rpy2 on a machine with ubuntu 8.04, having both R-base
| and R-base-dev
|
| When I run
| python setup.py install
| I get
| /usr/bin/ld: cannot find -lRlapack
| collect2: ld returned 1 exit status
| error: command 'gcc' fa
On 9 February 2009 at 14:39, Nathaniel Smith wrote:
| On Mon, Feb 9, 2009 at 1:06 PM, Laurent Gautier wrote:
| > I suppose that your have strong arguments for not moving from R-2.7 to R-2.8
| > ? NewDevDesc was a transition entity and has gone away with R-2.8.
| > (It's still a moving target, but
On 30 December 2008 at 14:03, B Clowers wrote:
| Under Ubuntu Hardy Heron I've downloaded and installed the latest version of
R (2.8.1).
| I would very much like to get rpy2 working on my system but continue to
| have installation problems related to the location of the lR, llapack, and
| lblas
On 20 October 2008 at 11:42, laurent oget wrote:
| I have built and used Rpy2 on ubuntu so it can be done, however the
| API are different and replacing rpy with rpy2 in ubuntu packages will
| break a lot of code using rpy.
Sure, but that wasn't the question.
The question was about rpy (v1) now
On 2 September 2008 at 20:01, laurent wrote:
| I have it working with --cppflags on ubuntu (and that's debian-based,
| isn't it ?)
Right. But the -lRlapack vs -llapack switch only happened more recently at
Ubuntu 8.04, so on older systems you wouldn't have seen it yet.
| rpy2's setup.py is gett
On 2 September 2008 at 18:26, Robert Nuske wrote:
| > I may have seen that one problem mentioned earlier to the list.
| me to, but can't find it now
|
| > The location of R's include files is seemingly a bit too exotic for the
| > disutils script.
| they were placed there by the debian package
On Mon, Jun 09, 2008 at 01:41:21PM -0400, Gregory Warnes wrote:
>
> Well, unless/until we change the implementation, I think the rpy
> package really must match the exact version*s* of R it was compiled
> againts.
>
> Note, however, that RPy is designed so that one can compile against
> sev
On Mon, Jun 09, 2008 at 12:36:19PM -0400, Gregory Warnes wrote:
> Aside, since rpy _does_ check for specific R versions, would it not be
> advisable for the .deb dependencies to reflect this appropriately?
I tried that for a while but discontinued because it can lead to
upgrade blocks just becau
On 8 June 2008 at 11:15, Lars Tangvald wrote:
| Laurent Gautier skrev:
| > 2008/6/7 Dirk Eddelbuettel <[EMAIL PROTECTED]>:
| >
| >> On 5 June 2008 at 11:08, Laurent Gautier wrote:
| >> | The "issue" is with the .deb packager.
| >> | That means that R-2
On 5 June 2008 at 11:08, Laurent Gautier wrote:
| The "issue" is with the .deb packager.
| That means that R-2.6.2 was not around when the package was built (may
| be it was not released then).
It's a synchronisation issue. For Debian, where I maintain R, RPy, ...,
I tend to rebuild RPy when a ne
On Wed, May 14, 2008 at 02:36:27PM -0400, Gregory Warnes wrote:
> I just committed a change to use R CMD config LAPACK_LIBS. Can you
> check if it behaves properly?
I get the commit emails, so I just hand-applied the changes to the two files.
Seems to work fine -- i.e. it built. So thumbs up!
On Wed, May 14, 2008 at 01:06:38PM -0400, Gregory Warnes wrote:
> Too bad.
>
> I guess I'll have to either add code to look for
>
> libRlapack.so
>
> in the appropriate directory. Know of any simple way to do this?
Glad you asked :) I remembered that 'R CMD ...' added the new command
'co
Hi Greg,
On Wed, May 14, 2008 at 10:08:29AM -0400, Gregory. R. Warnes wrote:
>
> Hi Dirk,
>
> Is it sufficient to simply add lapack to the list of libraries?
>
> libraries=['R','Rlapack','lapack']
Nice idea, but I'm afraid no cigar yet. From a test build I just launched:
[...]
gcc -p
Hi Greg,
On 12 May 2008 at 23:54, Gregory. R. Warnes wrote:
| Hi All,
|
| I've just placed RPy 1.0.3 on SourceForge. The primary purpose of
| this release is to provide support for R 2.7.0.
Thanks for that.
As with 1.0.2, we need a baby-patch (see below) on Debian. The reason is
that we
On 5 November 2007 at 18:40, Toby Dylan Hocking wrote:
| I am trying to compile RPy SVN release 361 on Ubuntu dapper using gcc
| v.4.0.3. I have an identical software setup (I think) on a different
| machine, so I'm really confused as to why it I can get it to compile on
| the other machine but
(from rpy-list) created by Andrew
McNamara that resolves the C stack limit error produced by R in some
contexts, such as resizing the x11() window.(Closes: #401670)
-- Dirk Eddelbuettel <[EMAIL PROTECTED]> Mon, 12 Mar 2007 21:06:40 -0500
rpy (1.0~rc1-4) unstable; urgen
On Mon, Mar 19, 2007 at 02:17:05PM -0400, Joseph Perla wrote:
> No, that doesn't seem to be it. Both folders only have _rpy2040.so, when my
> version of R is clearly 2.4.1. My python2.5 site-packages actually has more
> files related to rpy than 2.4.
>
> In any case, this is a simple problem to
On 19 March 2007 at 11:19, Joseph Perla wrote:
| Hi everyone,
|
| Just to let you know about a little bug. On a fresh install of Ubuntu
| Feisty (7.04), I apt-get install python-rpy which installs all
| dependencies. Whet I fire up Python and import rpy, I get this error:
|
| RHOME= /usr/lib/R
On 19 February 2007 at 13:58, Joseph Perla wrote:
| Okay, that's fine. I ignored the consistency check because it is a
| sub-point release, probably changing just a couple unimportant things in R.
|
| I'm now using the correct version, but I still get the same error when I,
| say, resize the win
(now off rpy-list)
On 1 November 2006 at 17:14, Jonathan E. Magen wrote:
| I actually got it to work using pycentral:
|
| sudo pycentral pkginstall python-rpy
Then it is a bug as that should happen automagically.
Dirk
--
Hell, there are no rules here - we're trying to accomplish something.
On 1 November 2006 at 14:26, Jonathan E. Magen wrote:
| Works fine now. Thank you very much! Should I be filing a package bug now?
Guess not -- looks like you may simply have failed to have matching packages
between R and Python. I had assumed you were up-to-date, maybe you weren't.
Dirk
--
H
Hi,
On 31 October 2006 at 15:57, Jonathan E. Magen wrote:
| I checked it out and my sys.path does have
| /usr/lib/python2.N/site-packages in there which is where the rpy SO
| is. The full path of the SO looks wierd to me:
|
| /usr/lib/python2.4/site-packages/_rpy2031.so
|
| I tried importing it
On 20 October 2006 at 12:46, Felipe Ortega wrote:
| I've got an error trying to import rpy in Debian (not
| in Windows, like some previous messages pointed out).
|
| The error message is:
|
| Python 2.3.5 (#2, Nov 20 2005, 16:40:39)
| >>> import rpy
| RHOME= /usr/lib/R
| RVERSION= 2.3.1
^
On 8 August 2006 at 11:40, [EMAIL PROTECTED] wrote:
| I am using Rpy to do a Multiple Linear Regression in R, however, of all the
| coefficients I get from the regression, some of them are 'nan' instead of
being
| a number.
Two quickies:
Did you consider the possibility that your regression pro
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