[R-sig-phylo] plotting a time axis on a circular phylogram

2012-12-12 Thread Marcel Cardillo
Illustrator) is that there doesn't seem to be a large enough gap between the first and last tips in which an axis could be squeezed (my tree has 170 tips). Any advice gratefully accepted. cheers Marcel Cardillo -- http://www.macroevoeco.com/ http://biology.anu.ed

Re: [R-sig-phylo] plotting a time axis on a circular phylogram

2012-12-18 Thread Marcel Cardillo
y fails with circular trees. I'll try to fix that. HTH Emmanuel Marcel Cardillo wrote on 13/12/2012 09:37: Hello all I have been searching for a way to plot a time axis on a circular phylogram created using plot.phylo(type="fan"). I have seen such plots published but wasn't

Re: [R-sig-phylo] Problem on LAGOPUS package

2016-01-14 Thread Marcel Cardillo
Hi Charles I encountered the same error, and just commented out the following line in the multidivtime function: #write(paste(" kappa = ", kappa, "* initial or fixed kappa",sep = ""), filename, append = TRUE) That seemed to allow the function to proceed, but then I ran into furthe