[R-sig-phylo] Problem on LAGOPUS package

2016-01-14 Thread Charles Pouchon
ments Do you know what’s the problem? PS: i have downloaded the last version (1.4-7). Thank you, ` Charles Pouchon Doctorant Laboratoire d'Écologie Alpine (LECA) UMR 5553 CNRS-UJF-UdS 2233 rue de la piscine - Bat D Biologie 3

[R-sig-phylo] Infer a matrix distance between gene trees without the same taxa

2016-02-19 Thread Charles Pouchon
number for the list of trees (all the trees must have the same tip labels). Do you know how can I compute a matrix distance between the trees without the same tip labels for each tree? Thank you best regards Charles P. ````` *Charl

[R-sig-phylo] Draw multiple ASR pies on nodes

2016-10-27 Thread Charles Pouchon
Hi, I'm sending this email because I have made an ancestral state reconstruction for three discrete traits using the R package "phytools", and I don't know how to draw the three asr pies on the node in a single plot. Do you know how to do this? Thank you, best rega

[R-sig-phylo] Help for QuaSSE analysis (diversitree)

2018-03-20 Thread Charles Pouchon
t$par* l.c l.m m.c drift diffusion -7.450302e+02 4.868530e+02 2.805533e-06 -1.125048e+01 4.334433e-01 I’m guessing that l.c and l.m refer to lambda estimates and m.c to mu, but could you tell me what the .c and .m attributes are? Moreover, in order to plot this