Hi Kev,
Thank you for your response!
Yes -- $States was a typo, sorry! Nevertheless, unclassing the model (on
my end) showed issues with the node labels (NA) and estimated $states (NaN).
Jeremy Beaulieu advised me to try updating my version of corHMM -- he was
spot on; I was using an old versio
Hi Michael,
When I run your code I get states for the nodes, so I'm not sure what the
problem is. However, I notice in your message you tried to get the node states
from $States, so I wonder if this is a typo or if this is the problem: the node
reconstructions are in $states (note the lower cas