Many thanks Jari - I did see that afterwards and have already forked it :-)
Thanks for the great resource.
Cheers, Marc
On Fri, Dec 7, 2018 at 12:28 PM Jari Oksanen wrote:
> Marc, the source code of those slides is in
> https://github.com/jarioksa/ordination101/. Look at the source code to
> see
Marc, the source code of those slides is in
https://github.com/jarioksa/ordination101/. Look at the source code to see how
the slide was generated.
cheers, Jari Oksanen
On 7 Dec 2018, at 09:34, Marc Taylor
mailto:marchtay...@gmail.com>> wrote:
Thanks Franz!
cheers, Marc
On Fri, Dec 7, 2018 a
Thanks Franz!
cheers, Marc
On Fri, Dec 7, 2018 at 7:44 AM Franz Krah wrote:
> Hi Marc,
>
> This is the example in the function envfit:
>
> library(vegan)
> data(varespec, varechem)
> library(MASS)
> ord <- metaMDS(varespec)
> (fit <- envfit(ord, varechem, perm = 999))
> scores(fit, "vectors")
>
Hi Marc,
This is the example in the function envfit:
library(vegan)
data(varespec, varechem)
library(MASS)
ord <- metaMDS(varespec)
(fit <- envfit(ord, varechem, perm = 999))
scores(fit, "vectors")
plot(ord)
plot(fit)
Cheers, Franz
-
Franz-S.
Hi all,
a quick question: Does anyone know what vegan function was called to
produce the following permutation test in this slide of Jari's:
http://cc.oulu.fi/~jarioksa/opetus/metodi/ordination101.html#44
Cheers,
Marc
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