[R-pkg-devel] pairwiseAlignment

2021-06-16 Thread csmatyi
Hello, I am trying to align two sequences, in DNAString format using the R command pairwiseAlignment. I keep getting this error: pairwiseAlignment(si,sj) Error in .Call2("XStringSet_align_pairwiseAlignment", pattern, subject, : max(nchar(pattern) * nchar(subject)) is too big (must be <= 21474

Re: [R-pkg-devel] pairwiseAlignment

2021-06-16 Thread Ben Bolker
I'm not sure this is the right venue for your question (the mailing list is for package *development*). You might try opening an issue at the package bug-report site: https://github.com/Bioconductor/Biostrings/issues or asking on https://www.biostars.org/ forum (where there are a lot of b