Re: [R] merging-binning data

2015-11-04 Thread Alaios via R-help
On Tue, Nov 3, 2015 at 10:47 AM, Alaios via R-help wrote: > Dear all,I am not exactly sure on what is the proper name of what I am trying > to do. > I have a vector that looks like >  binDistance >            [,1] >  [1,] 238.95162 >  [2,] 143.08590 >  [3,]  88.50923

Re: [R] merging-binning data

2015-11-04 Thread Alaios via R-help
tion time. Cheers, Boris On Nov 4, 2015, at 6:40 AM, Alaios via R-help wrote: > Thanks for the answer. Split does not give me the indexes though but only in > which group they fall in. I also need the index of the group. Is the first, > the second .. group?Alex > > >

Re: [R] merging-binning data

2015-11-04 Thread Alaios via R-help
n your downstream > analysis with the approach given above in a function, rather than storing > them at all. These are simple operations that should not add perceptibly to > execution time. > > Cheers, > Boris > > > > > > > On Nov 4, 2015, at 6:40 AM, Al

Re: [R] merging-binning data

2015-11-04 Thread Alaios via R-help
t; > > > > groups[groups == 2] > > > > > > Depending on the nature of your input data, it may be better to keep > > > these groups in a column adjacent to your values, rather than in a > > > separate vector, or even better to just calculate t

Re: [R] [FORGED] Re: merging-binning data

2015-11-05 Thread Alaios via R-help
sAlex On Wednesday, November 4, 2015 11:20 PM, Rolf Turner wrote: I have been vaguely following this thread and have become very confused given the complications that seem to have appeared. The original question was: >>>>> On Tue, Nov 3, 2015 at 10:47 AM, Ala

[R] improve my ggplot look

2015-11-19 Thread Alaios via R-help
ll be binger and the legends as well.Any ideas how I can do that? I would like to thank you for your reply RegardsAlex [[alternative HTML version deleted]] __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz

Re: [R] improve my ggplot look

2015-11-24 Thread Alaios via R-help
sons between the > maps). > > I would like to thank you for your support > Regards > Alex > > > > On Thursday, November 19, 2015 7:13 PM, Dennis Murphy > wrote: > > > Let's try this againsorry for hitting Send inadvertently. > > On Thu, Nov

Re: [R] improve my ggplot look

2015-11-24 Thread Alaios via R-help
ember 24, 2015 12:43 PM, Alaios via R-help wrote: Dear Dennis, it would be better if not plotting the lon and lat. Keeping it blank is better for the aesthetics of my map. I am not sure how I can give a reproducible example herebut I want to    ggmap(mp, darken = 0) + geom_point(aes(Longi

[R] Error running predict

2015-12-21 Thread topjetboy via R-help
s) : object 'make' not found What is 'make'? Is it looking for the gnu-C compiler? [[alternative HTML version deleted]] __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/lis

[R] clogit & weights

2015-12-21 Thread knouri via R-help
elyani,PhD   [[alternative HTML version deleted]] __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html a

[R] Multiplication of high dimensional array

2016-01-14 Thread guoxiong via R-help
at the svector and tmatrix as tensors, and use mul.tensor in tensorR to vectorize the computation, but so far I ways get one message or another indicating my incorrect usage. Can tensorR or any other package be used here to simply the calculation? If it can, would you kindly give some sample code

[R] getting values from php or javascript

2016-01-22 Thread Alaios via R-help
replyRegardsAlex [[alternative HTML version deleted]] __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and

[R] find numbers that fall in a region or the next available.

2016-02-02 Thread Alaios via R-help
thank you for your replyRegardsAlex [[alternative HTML version deleted]] __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-gui

Re: [R] [FORGED] find numbers that fall in a region or the next available.

2016-02-03 Thread Alaios via R-help
001) PlotPoints are gps coordinates. That would make it sure that I have no mistakes in my code. Any ideas?Alex On Tuesday, February 2, 2016 11:33 PM, Rolf Turner wrote: On 03/02/16 11:04, Alaios via R-help wrote: > Dear all,I have GPS coordinates (one vector for longitude and o

Re: [R] [FORGED] find numbers that fall in a region or the next available.

2016-02-03 Thread Alaios via R-help
&M University College Station, TX 77840-4352 -Original Message- From: R-help [mailto:r-help-boun...@r-project.org] On Behalf Of Alaios via R-help Sent: Wednesday, February 3, 2016 2:42 AM To: Rolf Turner; R-help Mailing List Subject: Re: [R] [FORGED] find numbers that fall in a regio

[R] Data structure to hold the following

2016-02-15 Thread Alaios via R-help
and thus we do not talk about fixed data structures before hand. I would like to thank you for your replyRegardsAlex [[alternative HTML version deleted]] __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch

Re: [R] Data structure to hold the following

2016-02-15 Thread Alaios via R-help
, February 15, 2016, Alaios via R-help wrote: Dear all,I am using R to emulate radio propagation dynamics. I have 90 antennas in a region and each of these 90 antennas hold information about 36 points (these are all exactly the same and there is no need to differentiate them further) Each of

[R] How to create an executable file from R GUI?

2016-02-18 Thread simon0098--- via R-help
Hi, I've created a GUI using RGtk2 package. How can I make an executable file from my R script so that users click on it and the GUI appears for them? [[alternative HTML version deleted]] ______ R-help@r-project.org mailing list

Re: [R] How to create an executable file from R GUI?

2016-02-20 Thread simon0098--- via R-help
So I decided to look for alternative method. [[alternative HTML version deleted]] ______ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://

[R] R portable is unable to open base package

2016-02-22 Thread simon0098--- via R-help
base package using install.packages("base") but R gave a warning: package 'base' is not available (for version R 3.2.3) How should I solve this problem? [[alternative HTML version deleted]] ______ R-help@r-project.org mailing l

Re: [R] How to create an executable file from R GUI?

2016-02-22 Thread simon0098--- via R-help
is used to open a PDF file but as I click it, a window of some texts appear! I didn't think this problem would happen ! Let me know If you have any idea about it. [[alternative HTML version deleted]] __ R-help@r-project.org mai

[R] summation involving multiple summations

2016-03-19 Thread Mahmoud via R-help
___ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.

[R] write a function inside the summation in a more condensed form

2016-04-08 Thread Mahmoud via R-help
mmations are more than two I've tried the following form > y2=sum(sapply(1:2,function(i){sum(sapply(1:i,function(j){(3^(sum(sapply(i:j,function(l){x[l]}}))})) > > y2 [1] 819 But it didn't work, it gave another solution Any help or recommendations _______

[R] error: contextstack overflow

2016-04-12 Thread Mahmoud via R-help
Dear r users I've a loop that has 20 if else statements but it gave me the ""contextstack overflow"" error at statement 14 Is there any way to overcome this problem cause i'm forced to do that loop any help or recommendations please _____

[R] a replace for subset

2016-04-14 Thread ch.elahe via R-help
RY= FR, Light=off, OR=S, PAT=low) and one for (COUNTRY= FR, Light=on, OR=S, PAT=high) and …., as you see doing subset is time consuming, is there any other way?Thank you for any help.Elahe [[alternative HTML version deleted]] ______ R-help@r-project

[R] a replace for subset

2016-04-16 Thread ch.elahe via R-help
LU for (COUNTRY= FR, Light=off, OR=S, PAT=low) and one for (COUNTRY= FR, Light=on, OR=S, PAT=high) and …., as you see doing subset is time consuming, is there any other way? Thank you for any help. Elahe ______ R-help@r-project.org mailing list -- To UNSUBSC

Re: [R] a replace for subset

2016-04-16 Thread ch.elahe via R-help
facet_wrap or facet_grid give you what you want? On Sat, Apr 16, 2016 at 8:45 AM, ch.elahe via R-help wrote: Hi, >I have a data set (mydata), which a part of this is like the following: > > >'data.frame': 36190 obs. of 16 variables: >$ RE: int 38 4

[R] Creating two new variables conditional on retaining values from previous rows

2016-04-19 Thread pele.s--- via R-help
1/13/2015 2 1/20/2015 P2 1 1/13/2015 2 1/28/2015 P3 2 1/28/2015 2 2/28/2015 P4 3 2/28/2015 2 3/20/2015 P5 4 3/20/2015 Thanks for any help! ______ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.eth

[R] overlay two facet_grid

2016-04-20 Thread ch.elahe via R-help
facet_grid(FS+TRJ~OR+INV,labeller=label_both)+xlim(0,200)+ylim(0,1) Thanks for any help! Elahe ______ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide ht

[R] subset by multiple letters condition

2016-04-22 Thread ch.elahe via R-help
lize_t1_seq",... Thanks for any help ______ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.

Re: [R] subset by multiple letters condition

2016-04-23 Thread ch.elahe via R-help
repl("t2", Command, fixed=TRUE) > Command[hast1] [1] "_localize_t1_seq" "_localize_PD_t1" > Command[hasPD] [1] "_localize_PD""_localize_PD_t1" > Command[hast1 & hasPD] [1] "_localize_PD_t1" Jean On Fri, Apr 22, 2016 at 8:42

[R] assign color to subsets

2016-04-23 Thread ch.elahe via R-help
Command, fixed=TRUE) the colors I want in my plot are : hast1 and hast2 Thanks for any help. Elahe __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http

Re: [R] assign color to subsets

2016-04-24 Thread ch.elahe via R-help
#x27;))) This will give you a subset with just t1/t2 and you can use 'key' as the colour option for ggplot. Jim Holtman Data Munger Guru What is the problem that you are trying to solve? Tell me what you want to do, not how you want to do it. On Sat, Apr 23, 2016 at 4:16 PM, ch.e

Re: [R] assign color to subsets

2016-04-24 Thread ch.elahe via R-help
mutate(key = grep(".*(t1|t2).*", "\\1", Command, value = TRUE)) %>% > filter(!(Command %in% c('t1', 't2'))) > >This will give you a subset with just t1/t2 and you can use 'key' as the >colour option for ggplot. >

[R] how to use AND in grepl

2016-04-30 Thread ch.elahe via R-help
ommand) & grepl("pd",Command)) does anyone know how to apply AND in grepl? Thanks Elahe __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.

Re: [R] how to use AND in grepl

2016-05-02 Thread ch.elahe via R-help
pd.* t2.*)",df$Command) On Sat, Apr 30, 2016, 7:07 PM Tom Wright wrote: subset(df,grepl("t2|pd",x$Command)) > > > > >On Sat, Apr 30, 2016 at 2:38 PM, ch.elahe via R-help >wrote: > >Hi all, >> >>I have one factor variable in my df and I want

Re: [R] how to use AND in grepl

2016-05-02 Thread ch.elahe via R-help
not 0. It seems that this AND does not work. On Monday, May 2, 2016 5:05 AM, peter dalgaard wrote: On 02 May 2016, at 12:43 , ch.elahe via R-help wrote: > Thanks for your reply tom. After using > Subset(df,grepl("(.*t2.*pd.*)|(.*pd.*t2.*)"),df$Command) I get this error:

Re: [R] how to use AND in grepl

2016-05-02 Thread ch.elahe via R-help
|(.*pd.*t2.*)",df$Command), but it does not change anything in Command, when I check the size of it by sum(grepl("(.*t2.*pd.*)|(.*pd.*t2.*)",df$Command)) the result is 0, but I am sure that the size is not 0. It seems that this AND does not work. > > > >On Monday, M

[R] greek characters in Figures

2016-05-02 Thread Alaios via R-help
bar (for R version 3.2.4 Revised)  Any ideas what else I can try?I would like to thank you in advance for your replyRegardsAlex [[alternative HTML version deleted]] ______ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://st

Re: [R] how to use AND in grepl

2016-05-02 Thread ch.elahe via R-help
;On Mon, May 2, 2016 at 7:42 AM, wrote: > >Thanks Peter, you were right, the exact grepl is >grepl("(.*t2.*pd.*)|(.*pd.*t2.*)",df$Command), but it does not change anything >in Command, when I check the size of it by >sum(grepl("(.*t2.*pd.*)|(.*pd.*t2.*)",df$C

[R] undefined columns selected!

2016-05-04 Thread ch.elahe via R-help
any help, Elahe __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.

Re: [R] greek characters in Figures

2016-05-04 Thread Alaios via R-help
ry > https://cran.cnr.Berkeley.edu/src/contrib zugreifen:  nicht unterstütztes URL > SchemaWarnmeldung:Paket ‘latex2expr’ ist nicht verfügbar (for R version 3.2.4 > Revised)  On Monday, May 2, 2016 9:39 PM, David Winsemius wrote: > On May 2, 2016, at 10:32 AM, Alaios via R-h

[R] moran's I visualization example

2016-05-05 Thread Alaios via R-help
about. RegardsAlex [[alternative HTML version deleted]] ______ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.htm

[R] factor variables in logistic regression

2016-05-11 Thread ch.elahe via R-help
allowed thanks for any help, Elahe __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented

[R] changing factor to numbers without getting NAs

2016-05-13 Thread ch.elahe via R-help
o many NAs. Is there a way to change TSTMean into numeric without those NAs? I want TSTMean to be at the end like: TSTMean :int 100.2 104.3 . Thanks for any help Elahe ______ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see

Re: [R] changing factor to numbers without getting NAs

2016-05-13 Thread ch.elahe via R-help
Thanks Duncan, This type.convert works fine for me and gives me TSTMean with decimal, but I want to add this result as a new column to my df as int or num, how can I do this? Thanks, Elahe On Friday, May 13, 2016 2:15 PM, Duncan Murdoch wrote: On 13/05/2016 7:56 AM, ch.elahe via R-help

[R] mean for every quartile

2016-05-16 Thread ch.elahe via R-help
320 320 320 320 320 320 320 320 320 I do the following to get the quartiles: quantile(m$BR) 0% 25% 50% 75% 100% 256 320 320 368 512 now how can I get mean for each quartile? Thnaks for any help, Elahe __ R-help@r-project.org

Re: [R] mean for every quartile

2016-05-16 Thread ch.elahe via R-help
, Michael Dewey wrote: Dear Elahe In line On 16/05/2016 13:31, ch.elahe via R-help wrote: > Hi all, > I have a column in my df and I want to get quartiles for this column and then > calculate mean for each and every quartile, here is my column: > The quartiles are strictly speaking the bo

[R] 3D plots in R.3.2.3

2016-05-18 Thread ch.elahe via R-help
___ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.

[R] (no subject)

2016-10-29 Thread Elham - via R-help
;) Your attention would be really appreciated.Best Regards,Elham Dalalbshi Esfahani [[alternative HTML version deleted]] ______ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do r

[R] convert matrix

2016-10-29 Thread Elham - via R-help
) Your attention would be really appreciated.Best Regards,Elham Dalalbshi Esfahani [[alternative HTML version deleted]] ______ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do r

[R] Continuous Wavelet tranform in Biwavelet Package

2016-11-04 Thread FMH via R-help
]] __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.

Re: [R] question on lasso

2016-11-05 Thread oslo via R-help
Psychiatry, and Radiology Johns Hopkins University     [[alternative HTML version deleted]] __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http

[R] Duplicate row.names of lncRNA

2016-11-08 Thread Elham - via R-help
and another is lincRNA, with different bp. why?for meta analysis,I should aggregate them as mean.is it true in this situation? [[alternative HTML version deleted]] __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https

[R] Duplicate row.names of lncRNA

2016-11-08 Thread Elham - via R-help
]] __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.

[R] transpose rows and columns for large data

2016-11-29 Thread Elham - via R-help
(stringAsFactors = F)     Is there another way (I prefer a way with Excel)? [[alternative HTML version deleted]] ______ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do r

Re: [R] transpose rows and columns for large data

2016-11-29 Thread Elham - via R-help
yes you have right about excel.by R,what should I do for transposing row and column? On Tuesday, November 29, 2016 9:13 PM, David Winsemius wrote: > On Nov 29, 2016, at 9:22 AM, Elham - via R-help wrote: > > Hi, > > I am trying to transpose large datasets inexcel

Re: [R] transpose rows and columns for large data

2016-11-29 Thread Elham - via R-help
ent.char = "", stringsAsFactors = F, header = T) transpose_data <- t(data) -Dan On Tue, Nov 29, 2016 at 9:56 AM, Elham - via R-help wrote: yes you have right about excel.by R,what should I do for transposing row and column?     On Tuesday, November 29, 2016 9:13 PM, David Winsemius wrote

[R] R re-base/compile problem

2016-12-01 Thread lejeczek via R-help
rpm build process is successful. To me it's strangest thing, but an expert hopefully knows what is going on there. many thanks, L. __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-h

[R] (no subject)

2016-12-06 Thread Elham - via R-help
total allocation of 6027Mb: see help(memory.size) [[alternative HTML version deleted]] ______ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R

[R] memory allocation problem

2016-12-06 Thread Elham - via R-help
total allocation of 6027Mb: see help(memory.size) [[alternative HTML version deleted]] ______ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R

[R] calculate correlations

2016-12-07 Thread Elham - via R-help
rs of columns whose related to control,then I counted all of control`s column and wrote 23 .now my question is,how does R understand what column is control and what is treatment? [[alternative HTML version deleted]] ______ R-help@r-project.org mailing l

Re: [R] calculate correlations

2016-12-07 Thread Elham - via R-help
you do not tell us how you know which column is which it is hard to answer the question of how R will know. On 07/12/2016 11:26, Elham - via R-help wrote: > Hi All,I have 11 human RNA-seq data (control/treatment),The effect of various > drugs on various cancers,I want to calculate the genes-

[R] help for

2016-12-30 Thread Elham - via R-help
[[alternative HTML version deleted]] ______ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.

Re: [R] help for

2016-12-30 Thread Elham - via R-help
d is that I like "tricky coding" (a personal problem).   Sarah -- There’s no obfuscated Perl contest because it’s pointless. —Jeff Polk Maranatha! <>< John McKown [[alternative HTML version deleted]] __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.

Re: [R] help for

2016-12-30 Thread Elham - via R-help
yes me too,but I do not have time to install and learn linux,I need tutorial based on windows On Saturday, December 31, 2016 3:50 AM, David Winsemius wrote: > On Dec 30, 2016, at 9:57 AM, Elham - via R-help wrote: > > hi all, I am followin

[R] GEOquery

2016-12-31 Thread Elham - via R-help
ernative HTML version deleted]] ______ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, mi

[R] Access GSE Data Tables from GEO by GEOquery

2016-12-31 Thread Elham - via R-help
                                                                       the result in R is: where is another samples?       __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting

[R] Network validation (of sorts) using granger Causality in R

2017-01-03 Thread PWD7052 via R-help
dition C) or a healthy cell (condition H)? (2) Is there a package in R that we can use for this purpose? Thank you very much! Pat [[alternative HTML version deleted]] __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https

[R] co-expression network of coding-noncoding genes

2017-01-11 Thread Elham - via R-help
ersion deleted]] ______ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.

[R] How these Plots are called? Which package

2017-01-14 Thread Alaios via R-help
Hello,how I can try something like that in R (in the attachment I am providing a sketch).Which packages would you try to use?I would like to thank you in advance for your helpRegardsAlex __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more

Re: [R] How these Plots are called? Which package

2017-01-14 Thread Alaios via R-help
can you see it now? I have uploaded it on my dropbox https://www.dropbox.com/s/9eikpabu6xflasa/Figure.jpg?dl=0 On Saturday, January 14, 2017 12:57 PM, John Kane wrote: No sign of attachment. On Saturday, January 14, 2017 5:42 AM, Alaios via R-help wrote: Hello,how I can

[R] caculate correlation

2017-01-30 Thread Elham - via R-help
27.T", ncoding.rpkm $name),-1],method = "spearman") [[alternative HTML version deleted]] __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide h

Re: [R] caculate correlation

2017-01-30 Thread Elham - via R-help
you tried to subset these matrices as you do in the "cor" function and see what is returned? Jim On Tue, Jan 31, 2017 at 6:40 AM, Elham - via R-help wrote: > for calculating correlation between coding and noncoding,first I transposed > data ,(rows become columns) so row is c

Re: [R] caculate correlation

2017-01-30 Thread Elham - via R-help
at coding.rpkm and ncoding.rkpm look > like, it is difficult to say. Have you tried to subset these matrices > as you do in the "cor" function and see what is returned? > > Jim > > On Tue, Jan 31, 2017 at 6:40 AM, Elham - via R-help > wrote: >> for calculating

[R] filter correlation data

2017-01-31 Thread Elham - via R-help
(inversely corerlated), and a p-value < 0.001 I should say that I transformed the big matrix in a table by library(reshape). [[alternative HTML version deleted]] __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see ht

Re: [R] filter correlation data

2017-01-31 Thread Elham - via R-help
t imediately to ?cor and friends? -- Bert Bert Gunter "The trouble with having an open mind is that people keep coming along and sticking things into it." -- Opus (aka Berkeley Breathed in his "Bloom County" comic strip ) On Tue, Jan 31, 2017 at 1:34 PM, Elham - via R-help wro

[R] How to prepare a input data for Cytoscape

2017-02-09 Thread Elham - via R-help
and others are edges? [[alternative HTML version deleted]] ______ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guid

[R] Averaging without NAs

2017-03-02 Thread ch.elahe via R-help
Elahe __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained

[R] Fw: Averaging without NAs

2017-03-02 Thread ch.elahe via R-help
__ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.

[R] Lattice and high-resolution tiffs

2009-06-29 Thread r-help . 20 . trevva
; > R.Version() $platform [1] "i386-pc-mingw32" $arch [1] "i386" $os [1] "mingw32" $system [1] "i386, mingw32" $status [1] "" $major [1] "2" $minor [1] "9.1" $year [1] "2009" $month [1] "06" $day [1] &q

[R] Titles on lattice colorkey

2009-04-03 Thread r-help . 20 . trevva
, xlab="", ylab="", main="Weird Function", sub="with log scales", region = TRUE, colorkey = list(space="right",title="Doesn't work")) Cheers, Mark __ R-help@r-pro

[R] unable to plot bode - phase with control package

2020-10-08 Thread fr1d_mail via R-help
ed point take a derivative and evaluate the order to add the proper number of pi ? Thanks for the help ! Best Frédéric ______ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the

Re: [R] unable to plot bode - phase with control package

2020-10-08 Thread fr1d_mail via R-help
olution is your itch, I am sure the maintainer of this _contributed package_ would welcome patches to add features. not relevant as my level is R coding is low... sorry Still looking for a *coding* solution to my issue... Best, Frédéric On October 8, 2020 12:08:19 AM PDT, fr1d_ma

Re: [R] FREDR and R 3.6

2020-10-29 Thread John via R-help
on this on the fredr information > package and was wondering if anyone here might know? > > ______ > R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read

Re: [R] long integer handling

2020-11-13 Thread JRG via R-help
t; IBM Canada ltd > Software developer > > [[alternative HTML version deleted]] > > __ > R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the postin

[R] - Trying to replicate VLOOKUP in R - help needed

2020-11-16 Thread Gregg via R-help
mutate(ASSIGNED_COMPANY = ifelse(grepl(pattern = 'DETROIT', x = NAME), 'NEC Detroit Arsenal', '')) VLOOKUP_inR_matching <- VLOOKUP_inR_matching %>% mutate(ASSIGNED_COMPANY = ifelse(grepl(pattern = 'BELVOIR', x = NAME), 'NEC Fort Belvoir', '

Re: [R] - Trying to replicate VLOOKUP in R - help needed

2020-11-18 Thread Gregg via R-help
package, a simple little VLOOKUP(like) function contained in a package would be of great use. r/ Gregg ‐‐‐ Original Message ‐‐‐ On Monday, November 16, 2020 1:56 PM, Gregg via R-help wrote: > PROBLEM: I am trying to replicate something like a VLOOKUP in R but am having &

Re: [R] - Trying to replicate VLOOKUP in R - help needed

2020-11-18 Thread Gregg via R-help
t; > On November 18, 2020 7:11:49 AM PST, Gregg via R-help r-help@r-project.org > wrote: > > > Thanks Andrew and Mitch for your help. > > With your assistance, I was able to sort this out. > > Since I have to do this type of thing of often, and since there is no > >

Re: [R] How to understand the mentality behind tidyverse and ggplot2?

2020-11-18 Thread John via R-help
tput tends to be fine, especially for publications and final graphics. One the other hand it's slower and fussier than some of the more traditional approaches, which are what I would prefer for EDA. JWDougherty __ R-help@r-project.org mailing list

Re: [R] Inappropriate color name

2020-11-20 Thread John via R-help
have expressed disappointment at the historical facts. They also prefer "American Indian" to "Native American." So, what to do??? JWDougherty __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.c

Re: [R] Inappropriate color name

2020-11-20 Thread John via R-help
ure to distinguish among tribal peoples as any such sweeping label could be. __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.

[R] repeted measures MANOVA - MANOVA.RM package

2020-11-21 Thread aliciablasit via R-help
Dear R-help listers, I tried to use functions from MANOVA.RM package but without success. In my case, I have several independent and dependent variables. Each subject corresponds to a single combination of IV (because they are not real subjects, but numerical models). For each of them, I have

[R] ON the installation of: abnormally-distributed/cvreg

2020-12-08 Thread Ishaqbaba via R-help
light for me on that. Thank youIshaq [[alternative HTML version deleted]] ______ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/po

Re: [R] HW help

2021-01-08 Thread JRG via R-help
u in advance, > > Zyra > > > ______ > R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide http://www.R-project.org/posting-guide.html > and provide com

[R] rmarkdown and source call to R file.

2021-01-21 Thread Georgios via R-help
x27;m stuck on this lines of code 2 days now. I would really appreciate any ideas. Thanks in advance for your help!!! ps. I tried all the combinations in Tools->Global Options-> "Evaluate chunks in directory" with no luck. __ R-

[R] GAM

2021-01-22 Thread devlin.chloe via R-help
a) if this is the correct method and b) how to interpret the results. If anyone could help with this it would be much appreciated Thanks __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help

Re: [R] rmarkdown and source call to R file.

2021-01-22 Thread Georgios via R-help
le,"simple") > ``` > > with > > ```{r} > getwd() > list.files() > ``` > > and see what the working directory is, and which files are available. > > Regards, > Yihui > > > On Fri, Jan 22, 2021 at 1:02 AM Georgios via R-help > wrote: >

Re: [R] Help with Using spTimer or spTDyn to estimate "GP" Model

2021-01-31 Thread alex_rugu--- via R-help
eo_unb) #How to use GibbsDyn or spT.Gibbs function to estimate the "GP" model for such unbalanced panel data? __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.

[R] Potential Bug: file.show does not support double-byte characters in the file path

2021-06-17 Thread Tim via R-help
ers if the file paths do not. For example, the content for "C:\Test\test.txt" can be "Testing 123 测试". file.show("C:\\Test\\test.txt") would open this file and display its content correctly without specifying the encoding parameter. Thanks, Tim [[alternative H

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