e angel of the x-axis. However, I was able to change
the first x-axis (BB...), but not the second one (Voegel). Maybe this
would solve the problem.
- If not, is there another possibility to fix the number of subplots per
line?
Kind regards
Sibylle
-Original Message-
From: R-help On Beha
Dear R community
It is possible to adjust the legend in combined ggplots using ggarrange with
be positions top, bottom, left and right.
My question: Is there a function to change the position of the legend to
topright or bottomleft? Right and top etc are in the middle of the axis.
Kind regards
Si
uot;black"), ncol=2)
fig1
Kind regards
Sibylle
From: John Kane
Sent: Monday, February 5, 2024 1:59 PM
To: sibylle.stoec...@gmx.ch
Cc: r-help@r-project.org
Subject: Re: [R] ggarrange & legend
Could you supply us with a MWE (minimal working example)of what you have so far?
Dear R-community
It would be nice to get some input how to find a solution for the following
error in igraph and vertex setting.
Thank you very much
Sibylle
> par(bg="black")
> network %>% plot(
+ vertex.color=clrs[V(.)$community],
+ vertex.size=V(.)$hub_score*1,
+ ve
Dear R-community
It would be nice to get some input how to find a solution for the following
error in igraph and vertex setting.
Error in intI(i, n = x@Dim[1], dn[[1]], give.dn = FALSE) :
Index größer als maximales 6
Kind regards
Sibylle
Working example
library(circlize)
library(ggplot2)
Dear coummunity
Thanks a lot to David and Kimmo. Yes I see now that I need to provide the two
raw tables. Find here the reproducible example.
Kind regards
Sibylle
# R-labraries
library(circlize)
library(ggplot2)
library(igraph)
library(tidyverse)
library(RColorBrewer)
library(stringi)
library(s
Dear Kimmo
First of all many thanks for the valuable advice to publish code and csv.
Noted.
Yes, "edge.width= E(.)$weight" makes definitively sense.
In the following code, which loads the tiff file, I get the following error
tiff("figures/AES_network_bymembership.tiff", width=1000, height=700,
ruary 26, 2024 10:15 AM
To: SIBYLLE STÖCKLI via R-help
Cc: sibylle.stoec...@gmx.ch
Subject: Re: [R] igraph_vertex
В Mon, 26 Feb 2024 09:02:56 +0100
SIBYLLE STÖCKLI via R-help пишет:
> In the following code, which loads the tiff file, I get the following
> error
This warning is definitel
Dear community
I am using ggraph to plot a network analysis. See part 2 in the working
example.
Besides different colors for different groups of nodes:
--> geom_node_point(aes(size = V(network)$hub_score*200, color=
as.factor(V(network)$community)))
I additionally want to consider different colors
+
scale_edge_width(range = c(0.2,4))+
scale_size(range = c(0.5,15)) +
theme(plot.background = element_rect(fill = "black"),
legend.position = "right",
panel.background = element_rect(fill = "black"))
dev.off()
-Original Message---
"color",
>
> value = c(viridis::viridis(21))
>
> [match(E(.)$type, c(factor(V(.)$name)))]) %>%
>
> set_vertex_attr(name = "trans_v_net", value = c(transitivity(., type
> =
> "local"))) %>%
>
>
Dear community
My aim is to import multiple .tif raster files using the help here:
https://stackoverflow.com/questions/52746936/how-to-efficiently-import-multi
ple-raster-tif-files-into-r
Does anyone now about the error "subscripts out of bounds"?
I am not sure about the check with alllrasters: i
ktop\NCCS_Impacts_Lot2_2022\InVEST\Species_Input\valpar_bee_presence",
> pattern='.tif$', all.files= T, full.names= T)
Error: '\U' used without hex digits in character string (:1:35)
Kind regards
Sibylle
-Original Message-
From: Ivan Krylov
Sent: Thursday, Ap
----
From: R-help On Behalf Of SIBYLLE STÖCKLI via
R-help
Sent: Thursday, April 18, 2024 6:48 PM
To: 'Ivan Krylov' ; 'SIBYLLE STÖCKLI via R-help'
Subject: Re: [R] Import multiple tif raster
Dear Ivan
Thanks a lot.
I tried now to provide the full path. However probably the
Hi
I am using ggplot to visualise y for a two-factorial group (Bio: 0 and 1) x
= 6 years. I was able to adapt the colour of the lines (green and red) and
the linetype (solid and dashed).
Challenge: my code produces now two legends. One with the colors for the
group and one with the linetype for th
uld like the additionally differentiate the
two lines (groups) in the linetype.
Sibylle
-Original Message-
From: Jeff Newmiller
Sent: Thursday, July 18, 2024 6:13 PM
To: sibylle.stoec...@gmx.ch; SIBYLLE STÖCKLI via R-help ;
r-help@r-project.org
Subject: Re: [R] ggplot two-factor
/07/2024, Rui Barradas escreveu:
> Às 16:27 de 18/07/2024, SIBYLLE STÖCKLI via R-help escreveu:
>> Hi
>>
>> I am using ggplot to visualise y for a two-factorial group (Bio: 0
>> and
>> 1) x
>> = 6 years. I was able to adapt the colour of the lines (green a
Dear community
Using after_stat() I was able to visualise ggplot with standard deviations
instead of a confidence interval as seen in the R help.
p1<-ggplot(data = MS1, aes(x= Jahr, y= QI_A,color=Bio, linetype=Bio)) +
geom_smooth(aes(fill=Bio,
ymax=after_stat(y+se*sqrt(len
lay a part, please?
Thank you
Erin Hodgess, PhD
mailto: erinm.hodg...@gmail.com <mailto:erinm.hodg...@gmail.com>
On Sun, Aug 11, 2024 at 10:10 AM SIBYLLE STÖCKLI via R-help
mailto:r-help@r-project.org> > wrote:
Dear community
Using after_stat() I was able to v
Dear community
I tried to run my ggplot() +geom_boxplot() code using nocht=TRUE, but probably
my term noch=TRUE is at the wrong position?
Error:
Error in `geom_boxplot()`:
! Problem while converting geom to grob.
ℹ Error occurred in the 1st layer.
Caused by error in `ans[ypos] <- rep(y
Dear community
Similar to the example of the rdocumentation, my idea is to use all.equal
and to print the difference.
https://www.rdocumentation.org/packages/base/versions/3.6.2/topics/all.equal
> d45 <- pi*(1/4 + 1:10)
> stopifnot(
+ all.equal(tan(d45), rep(1, 10))) # TRUE, b
internally for doing the comparison for
large rasters a block at a time if everything can't fit in memory at the same
time ...
On 2024-08-15 9:14 a.m., SIBYLLE STÖCKLI via R-help wrote:
> Dear community
>
>
>
> Similar to the example of the rdocumentation
LLE STÖCKLI via R-help
Cc: sibylle.stoec...@gmx.ch
Subject: Re: [R] allequal diff
В Fri, 16 Aug 2024 07:19:38 +0200
SIBYLLE STÖCKLI via R-help пишет:
> Is it possible to consider na.rm=TRUE?
> > all.equal(getValues(r1), getValues(r2_resampled), tolerance = 0)
>
> [1] "
: R-help On Behalf Of SIBYLLE STÖCKLI via
R-help
Sent: Friday, August 16, 2024 10:36 AM
To: 'Ivan Krylov' ; 'SIBYLLE STÖCKLI via R-help'
Subject: Re: [R] allequal diff
Many thanks Ivan
Use is.na() on getValues() outputs, combine the two masks using the | operator
ask1 & mask2)])
[1] "'is.NA' value mismatch: 389 in current 56989152 in target"
--> so there is just a mismatch in NA not in the xy pixels, right?
Sibylle
-Original Message-
From: Ivan Krylov
Sent: Friday, August 16, 2024 10:51 AM
To: sibylle.stoec...@gm
Dear community
I tried the following code using geom_boxplot() and notch=TRUE. Does anyone
know if the command �notch=TRUE� is at the wrong place in my special code
construct?
Without notch=TRUE the code provides the planned ggplot.
Kind regards
Sibylle
Code:
MS1<- MS %>% filte
1 + expand_limits(y=c(0, 80))
p1
-Original Message-
From: R-help On Behalf Of Ben Bolker
Sent: Friday, August 16, 2024 3:30 PM
To: r-help@r-project.org
Subject: Re: [R] boxplot notch
I don't see anything obviously wrong here. There may be something subtle,
but we probably won't
Message-
From: Ivan Krylov
Sent: Friday, August 16, 2024 11:45 AM
To: sibylle.stoec...@gmx.ch
Cc: 'SIBYLLE STÖCKLI via R-help'
Subject: Re: [R] allequal diff
В Fri, 16 Aug 2024 11:32:58 +0200
пишет:
> # values and mask r1
> r1 <- getValues(r1)
> mask1 <- is.na(r
t; To sort this sort of thing out, It would probably be useful for you
> > to find a tutorial on R's S3 class system (which is really a form
> > of multiple dispatch) and spend some time with it. There are many
> > good ones out there. This S3 system is widely use
Dear community
I have two raster files (here r and r2: y-axis) and an equal x-axis (here s,
4 classes).
Instead of plotting two boxplots I would like to plot paired boxplots: for
each class the boxplots from r and r2 paired).
I tried to adapt the code, but I am struggling around with the error
ITBioBedeu"
[15] "geometry"
> s<-sf$Unterregio
> r<-allrasters_pres[[1]]
>
>
> rs <- stack(r, s)
> names(rs) <- c('r', 's')
Error in `names<-`(`*tmp*`, value = c("r", "s")) :
incorrect number of layer names
quot;DEBioBedeu" "FRBioBedeu" "ITBioBedeu"
[15] "geometry"
> s<-sf$Unterregio
> r<-allrasters_pres[[1]]
Kind regards
Sibylle
-Original Message-
From: Ivan Krylov
Sent: Friday, August 23, 2024 5:30 PM
To: sibylle.stoec...@gmx.ch
Cc: 'SIB
rs_pres[[1]]
> names(r)
[1] "Andrena.barbilabris_glo_ensemble"
>
>
> rs <- stack(r, s)
> names(rs) <- c('r', 's')
Error in `names<-`(`*tmp*`, value = c("r", "s")) :
incorrect number of layer names
> names(rs)
[1] "Andrena.barbilabris
Dear community
This example code works
library(raster)
library(sp)
library(rgdal)
library(ggplot2)
# Create some sample raster data
raster_file <- raster(ncol=36, nrow=18)
raster_file[] <- 1:ncell(raster_file)
plot(raster_file)
#Create some sample polygons
cds1 <- rbind(c(-180,-20), c(-160,5),
.. .. ..@ projargs: chr "+proj=somerc +lat_0=46.952405556
+lon_0=7.439583 +k_0=1 +x_0=260 +y_0=120 +ellps=bessel +units=m
+no_defs"
.. .. ..$ comment: chr "PROJCRS[\"unknown\",\nBASEGEOGCRS[\"unknown\",\n
DATUM[\"Unknown based
Dear community
I have started to use the foreSIGHT package fo calculate some climatic
indicators.
Example
library(foreSIGHT)
func_avgDSD(WAAR$Ta, attArgs)
Dataset (WAAR, Ta = average daily temperature)
Year DOY Ta
1990 1 -2.45
1990 2 1.54
.
.
2001 1 4.54
,
2001 205 15.65
2001 206 20.14
.
2001 3
Dear community
To import multiple .dat weather files I am using list.files().
I intend to use the R package “ClimInd” to calculate different agroclimatic
indicators.
Question: Is there another solution to import multiple .dat files so that I can
select elements from the list, e.g. one specifi
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