Hi Elizabeth,
In confirmatory factor analysis with multiple groups, the reason one needs
to estimate the models simultaneously is that, typically, one is interested
in applying constraints (e.g., forcing all or some of the factor loadings
to be equal across groups). In exploratory factor analysis
On Thu, Jul 31, 2014 at 9:47 AM, Duncan Murdoch
wrote:
> On 30/07/2014, 2:20 PM, Yihui Xie wrote:
> > As a reader, I often want to run the code by myself _while_ I'm
> > reading a particular part of an article/report. I find it convenient
> > to be able to copy the code as I'm reading it, instead
Hi Ryan,
It does work, but the *apply family of functions always pass to the first
argument, so you can specify e2 = , but not e1 =. For example:
> sapply(1:3, `>`, e2 = 2)
[1] FALSE FALSE TRUE
>From ?sapply
'lapply' returns a list of the same length as 'X', each element of
which is
On Sat, Aug 9, 2014 at 9:56 AM, Patrick Burns
wrote:
> On 07/08/2014 07:21, Joshua Wiley wrote:
>
>> Hi Ryan,
>>
>> It does work, but the *apply family of functions always pass to the first
>> argument, so you can specify e2 = , but not e1 =. For example:
On Wed, Aug 13, 2014 at 7:41 AM, Rolf Turner
wrote:
> On 13/08/14 07:57, Ron Michael wrote:
>
>> Hi,
>>
>> I would need to get a clarification on a quite fundamental statistics
>> property, hope expeRts here would not mind if I post that here.
>>
>> I leant that variance-covariance matrix of the
Hi Lucy,
Try the gamlss.dist package, specifically the rWEI2() function.
Cheers,
Josh
On Wed, Sep 3, 2014 at 11:52 AM, Lucy Leigh
wrote:
> Hi,
> I wish to simulate some data from a Weibull distribution. The rweibull
> function in R uses the parameterisation
>
> 'with shape parameter a and sc
Hi Stephane,
This is the well known result of limitted floating point precision (e.g.,
http://www.validlab.com/goldberg/addendum.html). Using a test of
approximate rather than exact equality shows R yields the correct answer:
nperm <- 1
Fperm <- replicate(n=nperm, anova(lm(sample(Y) ~ F, dat
Hi,
Perhaps still not as short as you want, but I normally use which():
p <- c(1:10/100, NA, NaN)
p[which(p <= .05)]
[1] 0.01 0.02 0.03 0.04 0.05
Cheers,
Josh
On Tue, Oct 14, 2014 at 8:51 PM, Rainer M Krug wrote:
> Hi
>
> I want to evaluate NA and NaN to FALSE (for indexing) so I would lik
Hi Jeremy,
I don't know about references, but this around. See for example:
http://afni.nimh.nih.gov/sscc/gangc/tr.html
the relevant line in cor.test is:
STATISTIC <- c(t = sqrt(df) * r/sqrt(1 - r^2))
You can convert *t*s to *r*s and vice versa.
Best,
Josh
On Fri, Oct 17, 2014 at 10:32 AM
ject.org/posting-guide.html>
> and provide commented, minimal, self-contained, reproducible code.
>
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http://www.joshuawiley.com/
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> >
> >
> >
> > --
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> >
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value = 0.2423
>
> I am very new to R, so any help would be appreciated.
> Faiz.
>
Best of luck to you! I have found the list to be very helpful and
informative.
Joshua
--
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http://www.joshuawiley.com/
R help mailing list archive at Nabble.com.
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h,
> model="mlogit", data=TestData)
>
> I get the error
> Error in attr(tt, "depFactors")$depFactorVar :
> $ operator is invalid for atomic vectors
>
> Which i dont know what it means. The data is a subset of my real data but
> should reflect what im
n printout to be rounded to "digits". I have
looked through ?return ?cat ?print.
Can anyone suggest where I can learn how to do this (help pages, books, etc.)?
Thanks in advance,
Josh
--
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Senior in Psychology
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http://www.joshuawiley.com/
() just following the
suggestion from the return help page, but I will look at named vectors
also. So thank you for that idea too.
Thanks again.
Josh
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g mailing list
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suppose to make in statistics.
>
> Thank you all, and sorry for such basic questions.
> faiz.
>
>
>
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> Thank you so much.
>
> -Hyo
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in.com/in/vincentdavis>
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I think what you have done should be fine. read.table() will return a
data frame, which cor() can handle happily. For example:
my.data <- read.table("file.csv", header = TRUE, row.names = 1,
sep=",", strip.white = TRUE) # assign your data to "my.data"
cor(my.data) # calculate the correlation ma
ad the posting guide http://www.R-project.org/posting-guide.html
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R-he
ndows, I get NAs.
>
> --
> Michael D. Rennie, Ph.D.
> Postdoctoral Fellow, Environmental and Life Sciences Program
> Trent University
> 2140 East Bank Drive, DNA Building (2nd Floor)
> Peterborough, Ontario K9J 7B8
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sv but skip the first
> line. Possibly read the file, delete the first line and then send it
> to read.csv, or some other way?
>
> Thanks in advance,
> Mark
>
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score <- pt(q=t.score, df=df, lower.tail=F)
r.score <- t.score/sqrt((t.score^2)+df)
value <- list(t.score, p.score, r.score, s2.pooled, df)
names(value) <- c("t.contrast", "p.value", "r.contrast",
"pooled.variance", "df")
return(value)}
#
elp mailing list archive at Nabble.com.
>
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ing list archive at Nabble.com.
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> and provide commented, minimal, self-contained, re
rigin, but to my
knowledge, it was never implemented, and there is no way to set a
default (e.g., through options()).
> sessionInfo()
R version 2.10.1 (2009-12-14)
i386-pc-mingw32
locale:
[5] LC_TIME=English_United States.1252
--
Joshua Wiley
Senior in P
m the R help mailing list archive at Nabble.com.
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It is a bit of a side note really, but a convenient way to provide
data (particularly when it is complex) is via dput(). Not only is
this easier to read in, it preserves classes and other handy info.
For instance, once I had played around to get "Cook" and "Islands"
into one column (since there wa
advance.
>
> Cheers,
> --
> David Nemer
>
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c data. To use it in this case, you would need
to come up with rankings based on the position for each file name, and
use those pairs of numbers with cor().
> Cheers,
> --
> David Nemer
--
Joshua Wiley
Senior in Psychology
University of Californ
match(y,x)
> ranks
[1] 1 3 2
> cor(seq_along(x), ranks)
[1] 0.5
It seems like as long as both sets of filenames contain exactly the
same names, that should work.
>
> David Winsemius, MD
> West Hartford, CT
--
Joshua Wiley
Senior in Psychology
University of California, Ri
which are in the same positions.
>
> --
> David Nemer
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Joshua Wiley
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University of California, Riverside
http://www.joshuawiley.com/
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PLEASE d
ate(mod, .~1)
> models <- c(mod0, models) class(models) <- "glmlist"
> models
> }
>
>
--
Joshua Wiley
Senior in Psychology
University of California, Riverside
http://www.joshuawiley.com/
[[alternative HTML version deleted]]
_
.0
> 843.0 19.0
> 851.5 19.0
> 865.0 19.0
> 87 10.0 19.0
> 888.0 19.0
> 896.0 19.0
> 901.5 18.9
> 911.0 18.8
> 92 12.0 18.7
> 936.0 18.0
> 941.5 18.0
> 95 -1.0 18.0
> 968.0 18.0
> 97 50.
de.html<http://www.r-project.org/posting-guide.html>
> and provide commented, minimal, self-contained, reproducible code.
>
--
Joshua Wiley
Senior in Psychology
University of California, Riverside
http://www.joshuawiley.com/
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> and provide commented, minimal, self-contained, reproducible code.
>
--
Joshua Wiley
Senior in Psychology
University of California, Riverside
http://www.joshu
ted as character.
That may not be what you were intending. You can get around this by
creating a dataframe which can store different types of data.
Best regards,
Josh
--
Joshua Wiley
Senior in Psychology
University of California, Riverside
http://www.joshuawiley.com/
___
> try it with other data sets to see if I can reproduce my problems.
>
> Thanks,
> Kevin
>
>
>
> On Sun, Apr 18, 2010 at 1:29 AM, Joshua Wiley wrote:
>
>> On Sat, Apr 17, 2010 at 8:04 PM, Kevin Turner wrote:
>> > I have a frequency ta
org mailing list
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> PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
> and provide commented, minimal, self-contained, reproducible code.
>
--
Joshua Wiley
Senior in Psychology
University of California, Riv
gt;
> Walter
>
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gt;
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>
ot;while(Q2="
>
> 2010/4/21 Vlatka Matkovic Puljic
>>
>> Thank you!
>>
>> 2010/4/21 Joshua Wiley
>>>
>>> Hello,
>>>
>>> summary() removes NAs by default. You can get the same results using
>>>
>>> median
> R-help@r-project.org mailing list
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> PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
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"corSpatial"))
>>> debug(getS3method("recalc","corStruct"))
>>> debug(getS3method("Initialize","corSPT"))
>>> debug(getS3method("coef<-","corSPT"))
>>> debug(getS3method("coef","c
opt = "nlminb"))
Error in coef(object[[i]]) <- value[parMap[, i]] :
caught access violation - continue with care
>
Then it occurred to me that RGui sometimes behaves slightly
differently, and that you might be using the Gui so I ran it again
there and it crashed, froze, and I had to m
ne tell me if it is possible to do this recoding in R, or do I
> have to do it by hand?
>
> Best, Thomas
>
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if the reshape function can create new rows based on
> the meeting variable. For the second act there are three meetings, i.e.
> one meeting between discussion and agreement, and this should be entered
> as a separate row.
>
> Best, Thomas
>
> On Fri, 2010-04-23 at 07:45 -0700
//www.R-project.org/posting-guide.html
> and provide commented, minimal, self-contained, reproducible code.
>
--
Joshua Wiley
Senior in Psychology
University of California, Riverside
http://www.joshuawiley.com/
__
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ccepted.
I am sending some scripts to people who use Mac OS X, and (I am
assuming) they will not have Internet Explorer installed. If it does
not work, is there a more general way? At least for now, the website
is not using encryption (regular http) and is using basic
authentication controlled via
; Oscar
> Oscar A. Linares, MD
> Translational Medicine Unit
> La Plaisance Bay, Bolles Harbor
> Monroe, Michigan 48161
>
> Department of Medicine,
> University of Toledo College of Medicine
> Toledo, OH 43606-3390
>
> Department of Internal Medicine,
> The Detroit Medical Center (DMC)
> Ha
ete!
>
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g mailing list
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Senior in
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Hi Christophe,
I am able to plot dashed circles on Windows. I'm afraid I do not have any
suggestions for you. What happens when you try to plot it on Windows?
Joshua Wiley
Original message
>Date: Mon, 27 Apr 2009 22:15:53 +0200
>From: r-help-boun...@r-project.org (o
I am running SP3. You said earlier that you were having trouble downloading
2.9.0, are you sure everything downloaded and installed properly? There have
been some questions about transitioning to the new build going around.
Joshua Wiley
Original message
>Date: Mon, 27 Apr 2009
I read that the lty=2 argument does not work on all graphics devices. You might
double check that since it works on mac.
Joshua Wiley
Original message
>Date: Mon, 27 Apr 2009 22:58:11 +0200
>From: Christophe Dutang
>Subject: Re: [R] problem with symbol function
&g
for the
inconvenience.
Joshua Wiley
Original message
>Date: Mon, 27 Apr 2009 17:12:18 -0400
>From: Duncan Murdoch
>Subject: Re: [R] problem with symbol function
>To: Joshua Wiley
>Cc: r-help@r-project.org, Christophe Dutang
>
>On 27/04/2009 4:29 PM, Josh
It probably depends on the mini, but it seems to work okay on my HP 1030nr with
XP home (1.6 ghz intel atom, 1GB RAM, 16GB SSD). If I am working with larger
datasets, I usually use my desktop. A lot of people like to use Linux on minis
because it is often faster. If you are interested/concerned,
ple$X2==4, 3, NA))) ## this seems sloppy to me
> example
X1 X2 X3
1 1.75308880 1 -3
2 -0.49273616 2 -1
3 -0.12446648 3 1
4 -0.06417217 4 3
Thanks for your help,
Joshua
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Hello,
Thanks for all of your responses. I got a lot of great options that work.
Thanks again!
Joshua
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--
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mental and Clinical Oncology and Hematology, University
> of Genova, Genova, Italy
> Guest Researcher, LMP, NCI, NIH, Bethesda MD
>
> Work: 301-451-8575
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w I could make sure that the resampling procedure used by
> "boot" respects the subject level information?
>
> Thanks a lot for your help/advice!
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1)
> # create the response vector by hand:
> Y=airquality2$Ozone
> # is the same as:
> m1$model$Ozone
> # Now solve for the parameter estimates:
>
> solve(crossprod(X)) %*% crossprod(X,Y) #gives the correct answer
>
> library(MASS)
> ginv(t(X)%*%X)%*%t(X)%*%Y #gives
; [2] LC_CTYPE=English_United States.1252
>>> [3] LC_MONETARY=English_United States.1252
>>> [4] LC_NUMERIC=C
>>> [5] LC_TIME=English_United States.1252
>>>
>>> attached base packages:
>>> [1] stats graphics grDevices utils datasets methods ba
hanks in advance,
> D V Kiran Kumar
>
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Realized I did not reply to this list.
On Sat, Jan 26, 2013 at 7:54 PM, Joshua Wiley wrote:
> Hi Erin,
>
> Most packages creating output for inclusion in pages, reports, books,
> etc. do some rounding as R's default level of printed precision tends
> to be overkill. R2
sting guide http://www.R-project.org/posting-guide.html
>> and provide commented, minimal, self-contained, reproducible code.
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> PLEASE do read the po
%% done", round((i/combinations)*100))
> setWinProgressBar(pb, (i/combinations)*100, label=info)
> }
>
> close(pb)
>
> # now, simply feed the values replicated the number of times we want to run
> the simulation into the sequential.unpaired function, and assign the values
>
here are probably more direct ways of doing the same thing and storing the
>> resulting lm objects in a list, but you did not state what you intend to do
>> with this enormous set of regressions...
>>
>>
>> Regards
>>
>> > Thanks for any he
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elch (ivo.we...@gmail.com)
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lp
> PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
> and provide commented, minimal, self-contained, reproducible code.
--
Joshua Wiley
Ph.D. Student, Health Psychology
University of California, Los Angeles
http://joshuawiley.com/
Senior Analyst - Elkhar
0 0 0 ...
> $ maternal_age_c: num -6.12 -3.12 -3.12 -1.12 -3.12 ...
> $ birth_year_c : num -14.8 -14.8 -14.8 -14.8 -14.8 ...
>
> [[alternative HTML version deleted]]
>
>
> __
> R-help@r-project.org mailing l
> On Mon, Mar 25, 2013 at 6:18 PM, Joshua Wiley
> wrote:
>>
>> Hi Antonio,
>>
>> If wealth is a factor variable, you should include the main effect in
>> the model, as the smooths will be centered.
>>
>> Cheers,
>>
>> Josh
>>
>&
/r-help
> PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
> and provide commented, minimal, self-contained, reproducible code.
--
Joshua Wiley
Ph.D. Student, Health Psychology
University of California, Los Angeles
ht
[DiffVec>0])}
> diff<-cbind(FiveMinusOne,TenMinusOne)diff<-cbind(diff,
> TenMinusFive)sn<-seq(1, length(lamdaseq))f2<-cbind(sn, diff)f2
> ##END
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>
> __
720229, Romania
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uide
> http://www.R-project.org/posting-guide.html
> and provide commented, minimal, self-contained, reproducible code.
>
--
Joshua Wiley
Ph.D. Student, Health Psychology
University of California, Los Angeles
http://joshuawiley.com/
Senior Analyst - Elkhart Group Ltd.
http://elkhartgroup
_
> R-help@r-project.org mailing list
> https://stat.ethz.ch/mailman/listinfo/r-help
> PLEASE do read the posting guide
> http://www.R-project.org/posting-guide.html
> and provide commented, minimal, self-contained,
PLEASE do read the posting guide
> http://www.R-project.org/posting-guide.html
> and provide commented, minimal, self-contained, reproducible code.
>
>
--
Joshua Wiley
Ph.D. Student, Health Psychology
University of California, Los Angeles
http://joshuawiley.com/
Senior Analyst - Elkhar
On Thu, Jun 6, 2013 at 9:05 AM, William Dunlap wrote:
>
> I said the force was 'required' in the sense that without it
> the function will fail to do what you want in some situations.
With the Force on your side, functions always do what you want.
>
> Bill Dunlap
> Spotfire, TIBCO Software
> wdu
ope you are having a nice summer.
>
> pj
>
> --
> Paul E. Johnson
> Professor, Political Science Assoc. Director
> 1541 Lilac Lane, Room 504 Center for Research Methods
> University of Kansas University of Kansas
> http://pj.freefaculty.org
would do this to get the highest non-missing level:
>
> x <- pmax(3*cg, 2*hs, es, 0, na.rm=TRUE)
>
> rock chalk...
>
> -nfultz
>
> On Fri, Jun 07, 2013 at 06:24:50PM -0700, Joshua Wiley wrote:
>> Hi Paul,
>>
>> Unless you have truly offended the
2 Total (i.e. Null); 1 Residual
>>> Null Deviance: 13.86
>>> Residual Deviance: 5.407AIC: 9.407
>>
>> Those two results look very similar and it is with a data situation that
>> seems somewhat extreme. The concern is for the 1% numerical dif
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> R-help@r-project.org mailing list
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> PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
> and provide commented, minimal, self-contained, reproducible code.
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