[R] processing log file

2009-11-13 Thread Jabez Wilson
Dear all, I'm trying to process a log file which logs the date, the username and the computer number accessed. The table looks like this: >table.users Date UserName Machine 1  2008-11-25 John 641 2  2008-11-25    Clive 611 3  2008-11-25   Jeremy 641 4  2008-11-25 Walt 

Re: [R] processing log file

2009-11-13 Thread Jabez Wilson
   table(.df$Machine) }) lapply(split(table.users,table.users$Date),function(.df) {     table(.df$UserName) }) On Nov 13, 2009, Karl Ove Hufthammer wrote: On Fri, 13 Nov 2009 11:03:31 + (GMT) Jabez Wilson wrote: > What I want to do is to find out how many unique users logged > on each

[R] Re-arrange Columns in data frame

2009-11-25 Thread Jabez Wilson
Hi, I have a data frame which is 24 columns by 10 rows. This is essentially 6 groups of 4 columns. I want to re-arrange the columns into the following order 1,7,13,19,2,8,14,20,3,9,15,21,4,10,16,22,5,11,17,23,6,12,18,24 i.e. first of each group of 6 grouped together, then 2nd of each group of si

Re: [R] Re-arrange Columns in data frame

2009-11-25 Thread Jabez Wilson
Thanks very much. Using the matrix function and then DF[,ix] gives me exactly what I wanted. Jabez --- On Wed, 25/11/09, Gabor Grothendieck wrote: From: Gabor Grothendieck Subject: Re: [R] Re-arrange Columns in data frame To: "Jabez Wilson" Cc: "R Mailing List" Date: We

[R] pairwise.t.test vs t.test

2010-09-10 Thread Jabez Wilson
Dear all, I am perplexed when trying to get the same results using pairwise.t.test and t.test. I'm using examples in the ISwR library, >attach(red.cell.folate) I can get the same result for pairwise.t.test and t.test when I set the variances to be non-equal, but not when they are assumed to be e

Re: [R] pairwise.t.test vs t.test

2010-09-10 Thread Jabez Wilson
Thanks a lot, Peter. Excellent book btw.   Jab --- On Fri, 10/9/10, peter dalgaard wrote: From: peter dalgaard Subject: Re: [R] pairwise.t.test vs t.test To: "Jabez Wilson" Cc: "R-Help" Date: Friday, 10 September, 2010, 15:20 On Sep 10, 2010, at 16:01 , Jabez Wilson w

[R] interpreting one-way anova tables

2010-09-20 Thread Jabez Wilson
Hi, I am trying to reconcile anova table in R (summary(lm)) with individual t.test. datafilename="http://personality-project.org/R/datasets/R.appendix1.data"; data.ex1=read.table(datafilename,header=T) #read the data into a table summary(lm(Alertness~Dosage,data=data.ex1)) gives: Call: lm(form

[R] how to add "waiting for page change" to my script

2011-11-24 Thread Jabez Wilson
I'd like to "step" through 24 histograms by using the return or click button option, as shown in the demo(graphics) demonstration. I've searched for "interactive graphics", and "waiting for page change" in R documentation but with no result. I'm sure that this is a relatively straightforward pro

Re: [R] how to add "waiting for page change" to my script

2011-11-24 Thread Jabez Wilson
Thanks, Enrico, that will do nicely.   Jab --- On Thu, 24/11/11, Enrico Schumann wrote: From: Enrico Schumann Subject: Re: [R] how to add "waiting for page change" to my script To: "Jabez Wilson" Cc: "R-Help" Date: Thursday, 24 November, 2011, 13:20 see

Re: [R] how to add "waiting for page change" to my script

2011-11-24 Thread Jabez Wilson
That works wonderfully - thank you --- On Thu, 24/11/11, Jim Holtman wrote: From: Jim Holtman Subject: Re: [R] how to add "waiting for page change" to my script To: "Jabez Wilson" Cc: "R-Help" Date: Thursday, 24 November, 2011, 12:39 I thing it is par(ask =

[R] calculate mean of multiple rows in a data frame

2011-12-01 Thread Jabez Wilson
Dear all, I have a data frame (DF) in the following format: NAME ID a b c d 1 Control_1 probe~B01R01C01 381 213 345 653 2 Control_2 probe~B01R01C02 574 629 563 783 3 Control_1 probe~B01R09C01 673 511 521 967 4 Control_3 probe~B01R09C02 53 809 999 50 5 MM0289~RFU:11810.15 probe~B29R13

[R] Fw: calculate mean of multiple rows in a data frame

2011-12-01 Thread Jabez Wilson
 probe~B29R13C06 99 544 607 984 6 MM0289~RFU:9238.41 probe~B29R13C05 605 603 862 575 7 MM16597~RFU:36765.38 probe~B44R15C20 700 923 219 582 8 MM16597~RFU:41258.94 probe~B44R15C19 132 777 497 995 --- On Thu, 1/12/11, Jabez Wilson wrote: From: Jabez Wilson Subject: calculate mean of multiple

Re: [R] Fw: calculate mean of multiple rows in a data frame

2011-12-02 Thread Jabez Wilson
: [R] Fw: calculate mean of multiple rows in a data frame To: "Jabez Wilson" Cc: "R-Help" Date: Friday, 2 December, 2011, 14:29 It's easier for folks to help you if you put your example data in a format that can be readily read in R.  See, for example, the dput() functi

[R] replace numbers in a column conditional on their value

2008-01-16 Thread Jabez Wilson
Dear R help, I have a data frame column in which I would like to replace some of the numbers dependent on their value. data frame = zz AveExpr t P.Value FC 7.481964 7.323950 1.778503e-04 2.218760 7.585783 12.233056 6.679776e-06 2.155867 6.953215 6.996525 2.35

Re: [R] replace numbers in a column conditional on their value

2008-01-17 Thread Jabez Wilson
Splendid, thanks for your quick response. [EMAIL PROTECTED] wrote: > I have a data frame column in which I would like to replace some > of the numbers dependent on their value. > > data frame = zz > > AveExpr t P.Value FC > 7.481964 7.323950 1.778503e-04 2.218760 > 7.585783 12.233056 6.679776

[R] 1-pnorm values in a table

2008-03-06 Thread Jabez Wilson
Hi, I've read in a csv file (test.csv) which gives me the following table: Hin1 Hin2 Hin3Hin4 Hin5 Hin6 HAI1 9534.83 4001.74 157.16 3736.93 484.60 59.25 HAI2 13272.48 1519.88 36.35 33.64 46.68 82.11 HAI3 12587.71 5686.94 656.62 572.29 351.60 136.91 HAI4

Re: [R] 1-pnorm values in a table

2008-03-06 Thread Jabez Wilson
hsl.gov.uk> writes: [snip] > Try: > nrows <- 5 > mm <- matrix(rnorm(30),nrow=nrows) > sd.by.col <- apply(mm,2,sd) > mean.by.col <- apply(mm,2,mean) > values <- 1-mapply(pnorm, q=as.vector(mm), mean=rep(mean.by.col, > nrows)), sd=rep(sd.by.col, nrows))) values <- matrix(value

Re: [R] expression matrix

2008-03-10 Thread Jabez Wilson
>Date: Sat, 8 Mar 2008 04:56:58 -0800 (PST) >From: Keizer_71 <[EMAIL PROTECTED]> >Subject: [R] expression matrix >To: r-help@r-project.org >Message-ID: <[EMAIL PROTECTED]> >Content-Type: text/plain; charset=us-ascii >Hello, >I am to run this R script but i keep getting this error. >> expr<-expr

Re: [R] Statistical Questions: finding differentially expressed

2008-03-10 Thread Jabez Wilson
>Date: Thu, 6 Mar 2008 06:46:07 -0800 (PST) >From: Keizer_71 <[EMAIL PROTECTED]> >Subject: [R] Statistical Questions: finding differentially expressed >genes >To: r-help@r-project.org >Message-ID: <[EMAIL PROTECTED]> >Content-Type: text/plain; charset=us-ascii >Hi Everyone, >I am trying to find