[R] Reporting binomial logistic regression from R results

2018-11-11 Thread Frodo Jedi
Dear list members, I need some help in understanding whether I am doing correctly a binomial logistic regression and whether I am interpreting the results in the correct way. Also I would need an advice regarding the reporting of the results from the R functions. I want to report the results of a

Re: [R] Reporting binomial logistic regression from R results

2018-11-12 Thread Frodo Jedi
sults and their > presentation. Again your text seems to as good as any other. > > > > You should keep responses to mailing list as others could have another > opinion. > > > > Cheers > > Petr > > > > > > *From:* Frodo Jedi > *Sent:* Monday, Nove

Re: [R] Reporting binomial logistic regression from R results

2018-11-12 Thread Frodo Jedi
nt > at the 5% level, which can be inferred from glm output. Your last two > wald.tests don't test what you want to, since your model contains an > intercept term. You specified contrasts which tests A vs B-A, ie A- > (B-A)==0 <-> 2*A-B==0 which is not intended I think. Have a lo

Re: [R] Reporting binomial logistic regression from R results

2018-11-12 Thread Frodo Jedi
usion in online > forums like this that cannot provide the close back and forth that may be > required (as well as further appropriate study). > > Best, > Bert > > On Mon, Nov 12, 2018 at 11:09 AM Frodo Jedi < > frodojedi.mailingl...@gmail.com> wrote: > >> Dear

[R] t-test or ANOVA...who wins? Help please!

2011-01-04 Thread Frodo Jedi
Dear all, I need an help because I don´t know how to perform the analysis in the right way, as I get different beheaviors using t-test and two ways ANOVA. In what follow I post the table, my goal and the strange results I got. I kindly ask you an help because I really don´t know how to solve

Re: [R] t-test or ANOVA...who wins? Help please!

2011-01-05 Thread Frodo Jedi
istics ;-( Anyway I am doing my best to study and understand. Please enlighten me. Thanks in advance Best regards ________ From: Tal Galili To: Frodo Jedi Cc: r-help@r-project.org Sent: Wed, January 5, 2011 10:15:41 AM Subject: Re: [R] t-test or ANOVA...who wins

[R] Assumptions for ANOVA: the right way to check the normality

2011-01-05 Thread Frodo Jedi
Dear all, I would like to know which is the right way to check the normality assumption for performing ANOVA. How do you check normality for the following example? I did an experiment where people had to evaluate on a 7 point scale, the degree of realism of some stimuli presented in 2 condit

[R] Comparing fitting models

2011-01-05 Thread Frodo Jedi
Dear all, I have 3 models (from simple to complex) and I want to compare them in order to see if they fit equally well or not. From the R prompt I am not able to see where I can get this information. Let´s do an example: fit1<- lm(response ~ stimulus + condition + stimulus:condition, data=scrd)

Re: [R] Comparing fitting models

2011-01-06 Thread Frodo Jedi
r-help-boun...@r-project.org [mailto:r-help-boun...@r- > project.org] On Behalf Of Frodo Jedi > Sent: Wednesday, January 05, 2011 10:10 AM > To: r-help@r-project.org > Subject: [R] Comparing fitting models > > > Dear all, > I have 3 models (from simple to complex) and I want

Re: [R] Assumptions for ANOVA: the right way to check the normality

2011-01-06 Thread Frodo Jedi
Dear Robert, thanks so much!!! Now I understand! So you also think that I have to check only the residuals and not the data directly. Now just for curiosity I did the the shapiro test on the residuals. The problem is that on fit3 I don´t get from the test that the data are normally distribuited.

Re: [R] Comparing fitting models

2011-01-06 Thread Frodo Jedi
r-help-boun...@r-project.org [mailto:r-help-boun...@r- > project.org] On Behalf Of Frodo Jedi > Sent: Wednesday, January 05, 2011 10:10 AM > To: r-help@r-project.org > Subject: [R] Comparing fitting models > > > Dear all, > I have 3 models (from simple to complex) and I want

[R] Problem with 2-ways ANOVA interactions

2011-01-06 Thread Frodo Jedi
Dear All, I have a problem in understanding how the interactions of 2 ways ANOVA work, because I get conflicting results from a t-test and an anova. For most of you my problem is very simple I am sure. I need an help with an example, looking at one table I am analyzing. The table is in attachme

Re: [R] Problem with 2-ways ANOVA interactions

2011-01-06 Thread Frodo Jedi
:r-help-boun...@r- > project.org] On Behalf Of Frodo Jedi > Sent: Wednesday, January 05, 2011 4:10 PM > To: r-help@r-project.org > Subject: [R] Problem with 2-ways ANOVA interactions > > Dear All, > I have a problem in understanding how the interactions of 2 ways ANOVA > work,

Re: [R] Assumptions for ANOVA: the right way to check the normality

2011-01-06 Thread Frodo Jedi
un...@r-project.org [mailto:r-help-boun...@r- > project.org] On Behalf Of Frodo Jedi > Sent: Wednesday, January 05, 2011 3:22 PM > To: Robert Baer; r-help@r-project.org > Subject: Re: [R] Assumptions for ANOVA: the right way to check the > normality > > Dear Robert, [[elided Yahoo spam]] &g

Re: [R] Assumptions for ANOVA: the right way to check the normality

2011-01-06 Thread Frodo Jedi
), another is to use proportional odds logistic regression. -- Gregory (Greg) L. Snow Ph.D. Statistical Data Center Intermountain Healthcare greg.s...@imail.org 801.408.8111 > -Original Message- > From: r-help-boun...@r-project.org [mailto:r-help-boun...@r- > project.org] On Beh

[R] anova vs aov commands for anova with repeated measures

2011-01-07 Thread Frodo Jedi
Dear all, I need to understand a thing in the beheaviour of the two functions aov and anova in the following case involving an analysis of ANOVA with repeated measures: If I use the folowing command I don´t get any problem: >aov1 = aov(response ~ stimulus*condition + >Error(subject/(stimulus*co

Re: [R] anova vs aov commands for anova with repeated measures

2011-01-08 Thread Frodo Jedi
example of its use, but you will need to dig out the appropriate column yourself. From: r-help-boun...@r-project.org [r-help-boun...@r-project.org] On Behalf Of Frodo Jedi [frodo.j...@yahoo.com] Sent: 08 January 2011 01:51 To: r-help@r-project.org Subject

Re: [R] Assumptions for ANOVA: the right way to check the normality

2011-01-08 Thread Frodo Jedi
areas is useful if you don't have > enough experience to decide what you are comfortable with. > > > > For your description, I would try the proportional odds logistic > regression, but again, you should probably consult with someone who has > experience rather than trying th

Re: [R] anova vs aov commands for anova with repeated measures

2011-01-08 Thread Frodo Jedi
Dear Dieter, thanks a lot for your answer. Don´t you mind to do an example of the use of the command? For example, in attachment you find a .csv table resulting from an experiment, you can access it by means of this command: > scrd<- >read.csv(file='/Users/../tables_for_R/table_quality_wo

[R] Anova with repeated measures for unbalanced design

2011-01-08 Thread Frodo Jedi
Dear all, I need an help because I am really not able to find over internet a good example in R to analyze an unbalanced table with Anova with repeated measures. For unbalanced table I mean that the questions are not answered all by the same number of subjects. For a balanced case I would use the

Re: [R] Anova with repeated measures for unbalanced design

2011-01-08 Thread Frodo Jedi
Hi Ben, many many thanks!! From: Ben Bolker To: r-h...@stat.math.ethz.ch Sent: Sat, January 8, 2011 9:39:20 PM Subject: Re: [R] Anova with repeated measures for unbalanced design Frodo Jedi yahoo.com> writes: > > Dear all, > I need an help

[R] Post hoc analysis for ANOVA with repeated measures

2011-01-09 Thread Frodo Jedi
Dear all, how can I perform a post hoc analysis for ANOVA with repeated measures (in presence of a balanced design)? I am not able to find a good example over internet in R...is there among you someone so kind to give me an hint with a R example please? For example, the aov result of my analysis

Re: [R] Anova with repeated measures for unbalanced design

2011-01-09 Thread Frodo Jedi
ath.ethz.ch Sent: Sat, January 8, 2011 9:39:20 PM Subject: Re: [R] Anova with repeated measures for unbalanced design Frodo Jedi yahoo.com> writes: > > Dear all, > I need an help because I am really not able to find over > internet a good example > in R to analyze an unbal

Re: [R] Assumptions for ANOVA: the right way to check the normality

2011-01-10 Thread Frodo Jedi
normally distributed, but this still > assumes that the data is at least interval data, i.e. that we firmly > believe that the difference between a response of 1 and a response of 2 > is exactly the same as a difference between a 6 and a 7 and that the > difference from 4 to 6 is exactl

Re: [R] Assumptions for ANOVA: the right way to check the normality

2011-01-11 Thread Frodo Jedi
Many many thanks for your feedback Greg. You have been very enlightening for me. Now is time for me to study the material you kindly provided me. Thanks. From: Greg Snow Cc: "r-help@r-project.org" Sent: Tue, January 11, 2011 10:13:34 PM Subject: RE: [R] A