[R] why does system() truncates stdout output from large files?

¦ but I am probably missing something]? Many thanks Andrew -- Andrew Beckerman University of Sheffield [[alternative HTML version deleted]] __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the p

Re: [R] why does system() truncates stdout output from large files? (SOLUTION)

Dear all - Should anyone be interested - using paste(system(paste("awk 'NR==2'", file.genepop), intern = TRUE), collapse="") pulls together the pieces (list elements) of the returned values. -- Andrew Beckerman University of Sheffield On Tuesday, 17 S

[R] predict.rma (metafor package)

,method="REML") # multiple # example matrix for predicting against model3 newdat<-expand.grid(c(1,2,3,4,5),c(1,2,3)) predict(model1,newmods=c(1,2,3,4,5)) predict(model2,newmods=c(1,2,3)) predict(model3,newmods=newdat) -- Andrew Beckerman Sent with Sparrow (

[R] survreg and cluster and frailty

8 18 0.8397355 8 19 0.8397355 8 20 0.7203888 9 ----- Dr. Andrew Beckerman Department of Animal and Plant Sciences, University of Sheffield, Alfred Denny Building, Western Bank, Sheffield S10 2TN, UK ph +44 (0)114 222 0026; fx +44 (0)114 222 0002 http://www.beckslab.staff.she

Re: [R] Rscript on OSX

rew - Dr. Andrew Beckerman Department of Animal and Plant Sciences, University of Sheffield, Alfred Denny Building, Western Bank, Sheffield S10 2TN, UK ph +44 (0)114 222 0026; fx +44 (0)114 222 0002 http://www.beckslab.staff.shef.ac

Re: [R] Omnibus main effects in summary.lme?

)) should avoid the error and give a conservative estimate of the significance of your interaction. see also: http://tolstoy.newcastle.edu.au/R/e2/help/06/10/3565.html and related posts. A ----- Dr. Andrew Beckerman

[R] lattice contourplot line types

Dear all - I would like to adjust the line type of specific contours in contourplot from the lattice package, but it seems like lty does not take a list in the call. Here is my call to contourplot: contourplot(preds~size+trt|Size.Name, data=pred.dat,layout=c(2,4), at=c(0.02

Re: [R] lattice contourplot line types

at[seq(1, length(at), 2)] at.e <- at[seq(2, length(at), 2)] panel.contourplot(at = at.o, lty = 1, col = "blue", ...) panel.contourplot(at = at.e, lty = 4, col = "red", ...) }, at = pretty(grid$z, 10)) HTH, --sundar

[R] survreg and pweibull

evices methods base other attached packages: [1] survival_2.34-1 Hmisc_3.4-3 lattice_0.17-15 MASS_7.2-44 loaded via a namespace (and not attached): [1] cluster_1.11.11 grid_2.8.0 tools_2.8.0 Andrew -------

Re: [R] survreg and pweibull solved for any distribution

newdata to get just a single estimate? In the above example I used unique against the model predictions evaluated at every datapoint. But with no terms on the RHS of the model, how do you (can you) specify new data? Best wishes, Andrew On 26 Nov 2008, at 16:27, Andrew Beckerman wrot