Re: [R] Compilation problems with R4.4.0

2024-05-09 Thread Ivan Krylov via R-help
Glad you got R working! В Thu, 9 May 2024 12:19:49 + Simon Andrews пишет: > Does this need reporting upstream as a bug in R or lapack? Maybe in AlmaLinux (and I think RHEL9 too, but that's up to Miguel Esteva). Best case scenario, they somehow built the reference BLAS and LAPACK packages wi

Re: [R] Compilation problems with R4.4.0

2024-05-09 Thread Simon Andrews via R-help
From: Ivan Krylov Sent: 08 May 2024 20:05 To: Simon Andrews Cc: Simon Andrews via R-help ; Miguel Esteva Subject: Re: [R] Compilation problems with R4.4.0 В Wed, 8 May 2024 16:59:25 + Simon Andrews пишет: > The lapack libraries are: > > $ rpm -qa | grep lapack > lapack-3.

Re: [R] Compilation problems with R4.4.0

2024-05-08 Thread Ivan Krylov via R-help
В Wed, 8 May 2024 16:59:25 + Simon Andrews пишет: > The lapack libraries are: > > $ rpm -qa | grep lapack > lapack-3.9.0-10.el9.x86_64 > lapack64_-3.9.0-10.el9.x86_64 > lapack64-3.9.0-10.el9.x86_64 > lapack-devel-3.9.0-10.el9.x86_64 Thanks for this information! I figured out I needed to ena

Re: [R] Compilation problems with R4.4.0

2024-05-08 Thread Simon Andrews via R-help
Also just did a full errata update and retried the compilation. It failed exactly as before. -Original Message- From: Ivan Krylov Sent: 08 May 2024 16:09 To: Simon Andrews Cc: Simon Andrews via R-help ; Miguel Esteva Subject: Re: [R] Compilation problems with R4.4.0 В Wed, 8 May

Re: [R] Compilation problems with R4.4.0

2024-05-08 Thread Simon Andrews via R-help
k64-3.9.0-10.el9.x86_64 lapack-devel-3.9.0-10.el9.x86_64 -Original Message- From: Ivan Krylov Sent: 08 May 2024 16:09 To: Simon Andrews Cc: Simon Andrews via R-help ; Miguel Esteva Subject: Re: [R] Compilation problems with R4.4.0 В Wed, 8 May 2024 14:25:08 + Simon Andrews пишет: >

Re: [R] Compilation problems with R4.4.0

2024-05-08 Thread Ivan Krylov via R-help
В Wed, 8 May 2024 14:25:08 + Simon Andrews пишет: > #8 0x73f87c0b in dgesv ( > n=12884901891, nrhs=4294967299, > a=, > lda=12884901891, ipiv=..., > b=, > ldb=12884901891, info=0 > ) at /usr/src/debug/lapack-3.9.0-10.el9.x86_64/SRC/dgesv.f:167 > #9 0x750b2a17 in La_solve

Re: [R] Compilation problems with R4.4.0

2024-05-08 Thread Simon Andrews via R-help
0x8eb330, rho=0x45a518) at eval.c:1285 #76 0x77ce5a57 in setup_Rmainloop () at main.c:1166 #77 0x77ce6ae9 in Rf_mainloop () at main.c:1222 #78 0x0040106b in main (ac=, av=) at Rmain.c:29 -Original Message- From: Ivan Krylov Sent: 08 May 2024 15:12 To: Simon

Re: [R] Compilation problems with R4.4.0

2024-05-08 Thread Ivan Krylov via R-help
Dear Simon, В Wed, 8 May 2024 10:17:41 + Simon Andrews via R-help пишет: > I'm having a strange problem compiling R4.4.0 on an AlmaLinux9 box. > make[4]: Entering directory '/bi/apps/R/R-4.4.0/src/library/grDevices' > byte-compiling package 'grDevices' > > *** caught segfault *** > address

[R] Compilation problems with R4.4.0

2024-05-08 Thread Simon Andrews via R-help
I'm having a strange problem compiling R4.4.0 on an AlmaLinux9 box. I've compiled previous versions OK on the same hardware/software (last was R4.3.2) but 4.4.0 is repeatedly failing. Configuration works OK. ./configure --prefix=/bi/apps/R/4.4.0 --enable-R-shlib R is now configured for x86_64