[PyMOL] drawing a spring/arrow with pymol

2009-03-04 Thread Falgun Shah
Dear pymol users I am running SMD simulation. I want to draw arrow/spring to display direction of pulling of my ligand. i know it is possible with VMD. but i am more attracted to graphics in Pymol. is it some way i can draw arrow or spring connecting two atoms. please let me know -- Falgun H sha

Re: [PyMOL] drawing a spring/arrow with pymol

2009-03-13 Thread Falgun Shah
not work. Please let me know how to do it. thanks On Mon, Mar 9, 2009 at 5:19 PM, Falgun Shah wrote: > Dear Dr. warren > it did work the way you suggested , however i wanted spring instead of > dashed lines. Thanks for your help > > > On Mon, Mar 9, 2009 at 5:04 PM, Wa

[PyMOL] deleting dashes and creating images at different time step of simulation

2009-03-14 Thread Falgun Shah
Dear pymol user I have measured distances between residues and peptide using following commands: distance HB, resi 136 and name ND2, resi 583 and name OD2 distance HB, resi 135 and name ND2, resi 584 and name OD2 distance HB, resi 135 and name O, resi 584 and name NH2 so the object name is sa