Re: [PyMOL] volume representation is extremely dark colored

2020-05-27 Thread Stanevich, Vitali [JRDUS] via PyMOL-users
Thanks Thomas and Akbar! "set precomputed_lighting" did the trick and everything looks normal now. Vitali -Original Message- From: Thomas Holder Sent: Wednesday, May 27, 2020 2:24 AM To: Stanevich, Vitali [JRDUS] Cc: Mooers, Blaine H.M. (HSC) ; pymol-users@lists.sourceforge.net Sub

[PyMOL] Automatic Video generation

2020-05-27 Thread Mohamed Abdelaal
Hello everybody, I am doing molecular simulation using GROMACS program and I visualize the output (.pdb) using Pymol. I am inserting 4000 molecule inside a box, one molecule at a time, and after every insertion I convert the output into a .pdb file so at the end I have 4000 .pdb file. I want to g