[PyMOL] show as cartoon: dashed lines

Hi! I predicted the structure of a heterodimer using Swiss Model. Then I simulated it using GROMACS. When I opened the .gro file in PyMOL, it appeared normal at first. However, when I chose show as cartoon, I got dashed lines. I have attached a screenshot of the same. This problem did not occur bef

Re: [PyMOL] show as cartoon: dashed lines

Hi Raag, Do the two chains have chain identifiers? If not, then PyMOL's atom sorting will mess things up. Try this: set retain_order, 1 Cheers, Thomas > On Sep 13, 2017, at 6:40 PM, Raag Saluja wrote: > > Hi! > I predicted the structure of a heterodimer using Swiss Model. Then I > simulat