Dear pymol-users,
I'm still learning how to use pymol to do basic things.
At present, I'm working with a nucleic acid molecule that is colored by
sequence domains (each domain is a different objet). All the domains are
displayed in the cartoon mode, with backbone as dumbbell and
cartoon_ring_fi
I believe that you can only apply the cartoon setting to an entire obj
(object). And so you are correct in trying to duplicate the nucleotide so you
can apply one setting to it, while allowing the other setting to display the
rest of them. But that doesn’t work either since the program will only
Hi Maria and Adam,
I think it's not that complicated. You need "cartoon_ring_mode" for the residue
selection. Example:
fetch 1rna, async=0
as cartoon
select firstres, chain A & resi 1
set cartoon_ring_finder, 2
set cartoon_ring_mode, 2, firstres
color blue
color red, firstres extend 1
Hope that
I’m sorry, I thought she was trying to use two different cartoon modes and two
different colors.
> On Aug 2, 2016, at 12:07 PM, Thomas Holder
> wrote:
>
> Hi Maria and Adam,
>
> I think it's not that complicated. You need "cartoon_ring_mode" for the
> residue selection. Example:
>
> fetch
