[PyMOL] pymol homepage/error message

2011-04-17 Thread leila karami
Dear Thomas thanks for your attention. unfortunately, I could not use internet address you offered http://pymol.org/educational and http://pymol.org/academic.html. I encountered error message : *Explanation:* The request timed out before the page could be retrieved. *Try the following:* -

Re: [PyMOL] pymol

2011-04-17 Thread Jason Vertrees
Hi Zhao, The ATI drivers are a bit tricky on Linux. First, can you run "glxgears" ok? What is the output of "glxinfo"? I just installed the fglrx drivers on my machine and I had to hand-edit the xorg.conf file to get it working. What type of ATI video card is it? What distribution and version

Re: [PyMOL] Problems with set solvent_radius

2011-04-17 Thread Jason Vertrees
Hi Ian, PyMOL doesn't robustly handle solvent radius assignments that high (> 3.0). It breaks the rendering. Please file this in the open-source bug tracker (http://sourceforge.net/tracker/?group_id=4546&atid=104546) and I'll get to it when I can. Thanks, -- Jason On Fri, Apr 15, 2011 at 8:53

[PyMOL] VASCo win xp install

2011-04-17 Thread Shirley Hui
Hello, I am installed VASCo in my computer which is running Windows XP. I've also installed Python 2.4 (#60, Nov 30 2004, 11:49:19) [MSC v.1310 32 bit (Intel)] on win32 I followed the instructions to install VASCo, but when i run the test as: python VASCo.py -testrun I get the following error: