Hello,
There are plenty examples of how to create frames by loading several
structures (i.e one file, one frame).
What I want is to do something like this:
- load a structure
- set it as frame 1
- change representation and coloring
- set the view as frame 2
- show/hide several atoms,
- set t he vi
Hi,
Hope this is the correct place for this question :)
I have a pdb file with many small fragments in addition to a longer chain.
These are not numerated in any way, only separated by TER (example
below). In pymol, only two 'chains' appear, one with the long chain, and
the other with all the fra
Hi folks,
* Michael Lerner [2006-08-21 12:26] wrote:
> I think he means for you to have a "Load" button as part of your
> plugin. That button would first record the path to the file and then
> call through to cmd.load().
Perhaps what Ron needs to do is not use the cmd.load() function but
use hi
I think he means for you to have a "Load" button as part of your
plugin. That button would first record the path to the file and then
call through to cmd.load().
Perhaps what Ron needs to do is not use the cmd.load() function but
use his own file reading procedure. The lines containing coord
Dear Pymol users,
Would anyone tell me how to draw hydrogen bonds between interacting
atoms in a crystal structure of small molecule using Pymol. An attempt to do it
through mentioning cutoff distance as 3.0, and mode as 0, failed.
Command:
distance (selection1),(selection2)[,3.
Hi Siv,
Try giving each chain a unique identifier. As pymol might believe that all
the fragments belong to chain ' '.
Cheers
Noel
On Wednesday 23 August 2006 22:40, Siv Midtun Hollup wrote:
> Hi,
>
> Hope this is the correct place for this question :)
>
> I have a pdb file with many small fr
