> I'm very interested in knowing whether PyMOL is usable on the new
> MacBook considering that it has Intel integrated graphics.
Concerning integrated graphics: The Aqua-Desktop should be accelerated
on a MacBook as well, so hardware-OpenGL is there. If you are not
planning to visualize a riboso
Hi Noel,
Le Vendredi 19 Mai 2006 03:11, Noel Faux a écrit :
> Hi all,
>
> I've just finished the development of two new plugins and a modified
> version of the PDB loader plugin (now with proxy support). A proxy
> configuration plugin and a nsSNP loader plugin.
>
> The proxy plugin stores in a pi
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Hi Chen;
I guess the question is not about getting a "universal binary", buth
rather how the Radeon X1600 of the MacBook Pro compares with the
GMA950 of the MacBook !!!
Indeed I'd be very curious to know as well.
Serge.
Le 18 mai 06 à 20:40,
Hi Surendra,
split_states is a native Pymol command. If you download from the PDB the
"biological unit" coordinate file, you can show it using split_states OBJECT
Cheers,
Tsjerk
On 5/18/06, surendra negi wrote:
Hello pymol,
Is it possible to create biological unit of a
molecule using pym
Hi Mike,
Please note that the original question was about the new *MacBook*
(which has an integrated graphics chip) NOT the MacBook Pro (which comes
with a dedicated ATI accelerator, which is quite fast).
Mike Summers wrote:
> Marc,
>
> Pymol on a macbook pro is unbelievably fast. You can rota
Hi,
If I create a .psw file in Windows and send it to someone with an Apple,
can that person view it under Mac OS?
Thanks a lot!
- Eva
Yeah, my bad as I talked to Mark, hands faster than brain kind of thing
:-), and in fact, we are getting a MacBook soon, I am going to try to see,
and let everybody know.
Chen
On Fri, 19 May 2006, Serge Cohen wrote:
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Hi Chen;
I guess the questi
Hi,
Some suggestions:
1) Header file display.
2) Filelist : show a directory as a list, to avoid repeated "load" commands.
3) Ramachandran plots : I keep meaning to try dynoplot on the hybrid
pymol, but never do.
4) Secondary structure display.
Oh the list is endless! But number one suggestion
Hi Tskerk,
thanks for your message but it is not working. Finally
after some googling i found the original script.
Here is the script from link
http://www.ks.uiuc.edu/Research/vmd/mailing_list/vmd-l/2623.html
split_states 1c8e
delete 1c8e
zoom
spectrum b
hide lines
set c
Hi Surendra,
Perhaps you could tell us a little more about the problems you are having? Does
the PDB file load? Does the error occur after trying to split_stats? What is
that error?
I'm assuming that you are trying this on the 1c8e pdb? Or is there another
specific pdb that you're having proble
2) filelist:
Yes. Yes it does. Although typing "load " works too...
What I should have said was that I often find myself (and others in our
group have in the past) looking at a whole bunch of structures, one after
the other. When you are looking at 100s of structures in a row it gets
tiring to k
> 2) filelist:
>
> get a kind of temporary script which would be run on each file in the list
> when you opened it. A kind of frozen view (or a curried one?).
>
> Maybe I should just make it. Then I wouldn't have to explain the idea.
Ok, I was confused on what you meant before. I've been in s
1) Header file display.
2) Filelist : show a directory as a list, to avoid repeated "load"
commands.
this is a good idea, and a fairly easy one to implement. do you mean
present all of the pdb files (or the like) from a chosen directory in a
list, and load each molecule via a double-click?
FYI,
MacPyMOL runs just fine on a MacBook, but the graphics performance is only
about one quarter that of the MacBook Pro. My advice: Go Pro!
Cheers,
Warren
--
Warren L. DeLano, Ph.D.
Principal Scientist
. DeLano Scientific LLC
. 400 Oyster Point Blvd., Suite 213
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