al message
>Date: Wed, 16 Mar 2005 20:17:31 +0100
>From: Virgile ADAM
>Subject: Re: [PyMOL] surfaces and transparency
>To: pa...@strubi.ox.ac.uk, pymol-users@lists.sourceforge.net
>
> Dear Paula,
> for smoothen rendering, you can use the "smooth",
>
To smooth your surface representation try:
set surface_quality, 1
or higher if you wish, though it will take longer and might look odd.
The easiest way to do the other things would be to create separate objects for
each type of display.
Example: Show solid surface over most of a protein, with
Dear Paula,
for smoothen rendering, you can use the "smooth", "set
ribbon_smooth"... commands or try to raytrace your molecule thanks
to the "ray" command.
Concerning transparency, there is no simple way to my knowledge to render
transparency on some of the residues of a single loaded protein. Yo
