Inside a script, I would suggest adding ",async=0" so that the fetch command
is forced to complete before the next command is read:
fetch 1a25, async=0
show cartoon
create chaina, chain a
...
...
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Subject: Re: [PyMOL] pdb-l: chain alignment tool
Hi,
There are many. One way is to
Hi,
There are many. One way is to use PyMol (or, indeed many other
viewers). So I did it like this:
fetch 1a25
show cartoon
create chaina, chain a
create chainb, chain b
delete 1a25
align chaina, chainb
color red, chain a
color blue, chain b
I guess that this could be generalised into a script t