Re: [PyMOL] how to count all the Polar contacts

2014-05-27 Thread T. Nakane
Hi, And you can use get_raw_distances script at http://www.pymolwiki.org/index.php/Get_raw_distances to get detailed information about contacts. Best regards, Takanori Nakane On 2014-05-27 15:24, Sampson, Jared wrote: > Hi Merlin - > > Try limiting the distances shown to those between atoms in

Re: [PyMOL] how to count all the Polar contacts

2014-05-27 Thread Sampson, Jared
Hi Merlin - Try limiting the distances shown to those between atoms in specific selections using the `distance` command. For example, to show H-bonds to solvent, disable the “my_obj_pol_conts” object created by the technical preset and use the command: distance my_dist, my_obj and not solvent