Re: [PyMOL] Dot representation

2015-01-06 Thread Yarrow Madrona
Thanks Jared. On Mon, Jan 5, 2015 at 1:35 PM, Sampson, Jared wrote: > Hi Yarrow - > > 1. Yes, according to the wiki , the > dots are located on the vdW surface unless the `dot_solvent` setting is > turned on (in which case they’re on the solvent accessi

Re: [PyMOL] Dot representation

2015-01-05 Thread Sampson, Jared
Hi Yarrow - 1. Yes, according to the wiki, the dots are located on the vdW surface unless the `dot_solvent` setting is turned on (in which case they’re on the solvent accessible surface). 2. Based on the settings listed with “dot” in their names, it does

Re: [PyMOL] dot representation transparency setting

2008-08-12 Thread DeLano Scientific
Nope, sorry: a quick look at the code confirms that no provision has yet been been made for a transparent dots representation. Cheers, Warren -- DeLano Scientific LLC Subscriber Support Services mailto:supp...@delsci.com -Original Message- From: pymol-users-boun...@lists.sourceforge.ne