Hi Erica,
I prefer to leave the vdw value untouched, as this may affect operations
that rely on this value.
Instead you can alter the sphere scale:
set sphere_scale, ,
e.g.:
set sphere_scale, 1.5, hetatm
show_as spheres
will increase the sphere scale of heteroatoms (i.e. non-bonded) to 1.5
Che
Hi,
Just to chime in, you might need to call 'sort' and/or 'rebuild' after
using the alter command to see the changes.
Matt Baumgartner
On 11/20/2014 08:20 AM, Osvaldo Martin wrote:
Hi Erica,
I think something like:
alter name ca, vdw=10
should help. Change "10" for the value you want.
Be
Hi Erica,
I think something like:
alter name ca, vdw=10
should help. Change "10" for the value you want.
Best Regards,
Osvaldo.
On Wed, Nov 19, 2014 at 11:16 AM, Erica Valentini
wrote:
> Dear all,
>
> I would like to change the size of nonbonded spheres.
> They are nonbonded c-alpha atoms n
Dear all,
I would like to change the size of nonbonded spheres.
They are nonbonded c-alpha atoms not heteroatoms therefore I don't
know how to specifically select them in order to change them.
Thanks a lot in advance,
Erica
--
Erica Valentini
EMBL-Hamburg
Notkestrasse 85,
+49 040 899 02 182
