Hi Kelley,
I just worked out a procedure to do this with VMD/Raster3D (oops, this is
the PyMol list ...). Anyhow, it boils down to that you can apply selective
bounding or clipping planes in Raster3D. In the case of a clipped surface
you want to use a bounding plane, which slices through an object
Dear Pymollers,
I am trying to display a cross-section of an active site pocket with a
ligand bound in the active site. For the figure I would like to Z-clip the
active site residues (viewed as a surface representation), but not the
ligand. To accomplish this I would assume that I need to create
