RE: [PyMOL] Restrict surface transparency to limited region

2004-01-18 Thread Boris Brumshtein
Dear Roger, I probably have a very simple solution for you. First create two objects of your protein with a distinct names. Then show a non-transparent surface for one of the objects. Hide the surface for the residues you'd like to see under the transparent surface with a comand: "hide surf

RE: [PyMOL] Restrict surface transparency to limited region

2004-01-15 Thread Warren L. DeLano
t; Sent: Thursday, January 15, 2004 4:29 AM > To: pymol-users@lists.sourceforge.net > Subject: Re: [PyMOL] Restrict surface transparency to limited region > > > Hi Warren, > > Wouldn't it be possible to change the [r,g,b] representation in Pymol to > [r,g,b,t]. Then it woul

Re: [PyMOL] Restrict surface transparency to limited region

2004-01-15 Thread Tsjerk Wassenaar
ct surface transparency to limited region Dear PyMOL users/devs, I am trying to produce a figure with a molecular surface and would like to make this surface transparent only covering certain residues. I have tried creating a separate surface for these residues and the rest of the protein a

RE: [PyMOL] Restrict surface transparency to limited region

2004-01-14 Thread Warren L. DeLano
Subject: [PyMOL] Restrict surface transparency to limited region Dear PyMOL users/devs,   I am trying to produce a figure with a molecular surface and would like to make this surface transparent only covering certain residues. I have tried creating a separate surface for these residues and the rest of

[PyMOL] Restrict surface transparency to limited region

2004-01-14 Thread Roger Dodd
Dear PyMOL users/devs, I am trying to produce a figure with a molecular surface and would like to make this surface transparent only covering certain residues. I have tried creating a separate surface for these residues and the rest of the protein and setting transparency for the object coverin