Dear PyMOL users/devs, I am trying to produce a figure with a molecular surface and would like to make this surface transparent only covering certain residues. I have tried creating a separate surface for these residues and the rest of the protein and setting transparency for the object covering only those residues, but this gives a very discontinuous looking surface representation. Is it possible to just enable transparency on a limited region of a surface?
Thanks Roger -- Roger Dodd CIMR University of Cambridge Wellcome Trust / MRC Building Addenbrooke's Hospital Hills Road Cambridge CB2 2XY