Re: [PyMOL] Pymol, calculate enclosed volume of map

2012-09-18 Thread Jason Vertrees
Hi Ian, PyMOL doesn't yet have that functionality. We've recorded this case and will let the community know how development proceeds. I could imagine adding a suite of volumetric tools could be very useful. What else would you like to see? Cheers, -- Jason On Sun, Sep 16, 2012 at 12:48 PM, Ian

[PyMOL] Pymol, calculate enclosed volume of map

2012-09-16 Thread Ian Berke
Hi, I have a volumetric map from an EM reconstruction I loaded into pymol and contoured at 4sigma (it went through the normal statistical averaging and normalization in pymol). I'd like to calculate the volume enclosed by the 4sigma contour, so that I can calculate an estimated mass. Does anyone