Re: [PyMOL] PDB changed CONNECT records

2007-09-06 Thread DeLano Scientific
ists.sourceforge.net [mailto:pymol-users-boun...@lists.sourceforge.net] On Behalf Of DeLano Scientific Sent: Thursday, September 06, 2007 11:24 AM To: 'Mark A Saper'; 'Pymol' Subject: Re: [PyMOL] PDB changed CONNECT records Mark, set connect_mode = 0 is the default, and this uses

Re: [PyMOL] PDB changed CONNECT records

2007-09-06 Thread DeLano Scientific
alf Of Mark A Saper Sent: Thursday, September 06, 2007 10:48 AM To: Pymol Subject: [PyMOL] PDB changed CONNECT records This was previously discussed in an archived email but I can't find it right now. Does the setting connect_mode=0 use the CONECT records in the PDB file or not? I think it

Re: [PyMOL] PDB changed CONNECT records

2007-09-06 Thread Abhinav Verma
AFAIK setting connect_mode=1 strictly uses the CONECT records from pdb file to draw bonds. Cheers, Abhi. On 9/6/07, Mark A Saper wrote: > > This was previously discussed in an archived email but I can't find it > right now. Does the setting connect_mode=0 use the CONECT records in the > PDB f

[PyMOL] PDB changed CONNECT records

2007-09-06 Thread Mark A Saper
This was previously discussed in an archived email but I can't find it right now. Does the setting connect_mode=0 use the CONECT records in the PDB file or not? I think it does. Apparently in pdb code 1ABE, the CONECT records were changed in a 2005 revision. Two alternate sugar conformat