Re: [PyMOL] Dot representation

Thanks Jared. On Mon, Jan 5, 2015 at 1:35 PM, Sampson, Jared wrote: > Hi Yarrow - > > 1. Yes, according to the wiki , the > dots are located on the vdW surface unless the `dot_solvent` setting is > turned on (in which case they’re on the solvent accessi

Re: [PyMOL] Dot representation

Hi Yarrow - 1. Yes, according to the wiki, the dots are located on the vdW surface unless the `dot_solvent` setting is turned on (in which case they’re on the solvent accessible surface). 2. Based on the settings listed with “dot” in their names, it does

[PyMOL] Dot representation

Hell Pymolers, 1. Does anyone know what the dot representation for a residue represents? Is it the van der waals radii? 2. Is there a way to draw transparency for the dots? -Yarrow -- Yarrow Madrona, Ph.D. *Postdoctoral Scholar* University of California, San Francisco Department of Pharmaceut

Re: [PyMOL] dot representation transparency setting

...@lists.sourceforge.net [mailto:pymol-users-boun...@lists.sourceforge.net] On Behalf Of O. J. Ganesh Sent: Tuesday, August 12, 2008 2:50 PM To: pymol-users@lists.sourceforge.net Subject: [PyMOL] dot representation transparency setting Hey everyone, Is there a transparency setting for the dots representation

[PyMOL] dot representation transparency setting

Hey everyone, Is there a transparency setting for the dots representation? Something like stick_transparency? Thanks.