Re: [PyMOL] Help with rms_cur command

2014-10-06 Thread Soisson, Stephen M
Doh! Thanks. From: David Hall [mailto:li...@cowsandmilk.net] Sent: Monday, October 06, 2014 1:00 PM To: Soisson, Stephen M Cc: Subject: Re: [PyMOL] Help with rms_cur command almost definitely is http://www.mail-archive.com/pymol-users@lists.sourceforge.net/msg1.html -David On Mon, Oct

[PyMOL] Help with rms_cur command

2014-10-06 Thread Soisson, Stephen M
Hi everyone- I'm having a few issues with the rms_cur command that I am hoping someone can help with. I've pre-aligned several structures using 2 of 3 chains for the alignment. I now wish to calculate the rmsd over just a portion of the third chain without doing any further alignment. It loo

Re: [PyMOL] CGO fixed in space

2013-04-16 Thread Soisson, Stephen M
Is there a way to associate a wizard message with stored scenes so that the message changes with each scene? Thanks- Steve -Original Message- From: Jason Vertrees [mailto:jason.vertr...@schrodinger.com] Sent: Tuesday, April 16, 2013 1:20 AM To: Someone Else Cc: pymol-users Subject: Re:

Re: [PyMOL] Charged Surface Calculation at different pHs?

2010-04-07 Thread Soisson, Stephen M
Thanks Carsten and David Hall - I'll get started there. Thanks again! Steve From: Schubert, Carsten [PRDUS] [mailto:cschu...@its.jnj.com] Sent: Wednesday, April 07, 2010 2:22 PM To: Soisson, Stephen M; pymol-users@lists.sourceforge.net Subject: RE: [

[PyMOL] Charged Surface Calculation at different pHs?

2010-04-07 Thread Soisson, Stephen M
Hi- Does anyone know if it is possible to calculate the charged surface using apbs at different pHs? I am assuming the default pH is 7. Thanks in advance- Steve Notice: This e-mail message, together with any attachments, contains information of Merck & Co., Inc. (One Merck Drive, Whitehouse