[PyMOL] PyMOL and cctbx

Dear Simon and other pymolers, I have realised that the solution to getting cctbx working with pymol on windows I posted no longer works with recent builds of cctbx. I have found that the following solution works: 1. Download and install python (to the default location - C:\Python24) --> http://

[PyMOL] question on cctbx and pymol

Hi all, I hesitated to post this because I thought someone would have a more elegant solution, but I have got the draw_cell/symmops scripts working on windows with cctbx. I have had it working with all versions of PyMOL including the latest betas. I install PyMOL as usual in C:\Program Files\Delan

[PyMOL] Help/suggestions for illustrating lattice arrangement

Hi, I am trying to prepare a figure illustrating a fairly complex packing arrangement in a large H32 (R32) unit cell, where the packing may actually have some biological relevance. To try and show the packing I've been generating symmetry related molecules using the symexp command. The proble

[PyMOL] rgb to cmyk woes

uld ensure this didn't occur? Thanks in advance for any help Roger Dodd

[PyMOL] Pymol segmentation fault - fedora core 1

Hi everyone, I've recently updated to the 0.97 release of pymol and although it ran fine to start with, it's now generating a segmentation fault. I installed from the * pymol-0_97-bin-linux-libc6-i386.tgz*

[PyMOL] Error in sequence viewer

The sequence viewer is a brilliant addition to pymol and I'm already finding it quite useful after playing around with it a bit. However, I've noticed a possible bug, although I don't know what's causing it. When viewing the pdb file 1fe6 (a coiled coil protein) and using the sequence viewer, t

[PyMOL] Restrict surface transparency to limited region

covering only those residues, but this gives a very discontinuous looking surface representation. Is it possible to just enable transparency on a limited region of a surface? Thanks Roger -- Roger Dodd CIMR University of Cambridge Wellcome Trust / MRC Building Addenbrooke's Hospital Hills

[PyMOL] Display of electrostatic potential surfaces

so can the output from this program be understood by PyMOL in some way. Thanks for your help Roger -- Roger Dodd CIMR Addenbrooke's Hospital Cambridge