So when I run pymol 9.0 under XP on my laptop, the molecule screen takes
up the whole screen and can't be minimized. The programs works, but I
can't access the menus. Any ideas...?
Mike Ford
So I have heard that adobe premiere is the best for making movies from
the frames. If I have the frames in .tga format, could anyone sugguest
settings for compression, format etc.
Thanks,
Mike Ford
pymol-users-requ...@lists.sourceforge.net wrote:
Send PyMOL-users mailing list submissions t
You don't want to operate this way. Kristian Rother's movie script
(movie.py) is the way to go. Check out his web page:
http://www.rubor.de/bioinf/
This script has greatly simplified rotation commands. You just call the
script in your movie script.
I have included the script, an example m
gt;
> Cheers,
> Warren
>
> On Mon, 24 Feb 2003, Michael Ford wrote:
>
> >
> > I want to change the display of my molecule during a movie.
> >
> > For instance, I might want to turn a ligand yellow at frame 50 of a 100
> > frame
> > movie.
> &
I have made a pymol movie script that I think is quite something, and may be of
use to others trying to setup movies. The movie shows the dimer of a
carbohydrate
binding protein - galectin-1. I want to know where someone could 'host' the
movie
script so that it would be easily accessible (PyMol
For some reason this command works in the console, but won't run inside a
script -
Why???
"Warren L. DeLano" wrote:
> Mike,
>
> mappend 50:color yellow,ligand
>
> You'll want to restore the color at the beginning of the movie.
>
> Cheers,
> Warren
I want to change the display of my molecule during a movie.
For instance, I might want to turn a ligand yellow at frame 50 of a 100 frame
movie.
How would I go about this? mvSet - can this be used for other pymol commands?
I can use the mvRot and mvSinrot commands fine, but I want to do other
t
This is really a question for Warren, but I wanted to know if anyone else is
attempting the same thing:
I am trying to make PyMol movies out of my AMBER trajectories. I know that
Warren had said he had some code to implement this. I would love to get my
hands
on this.
I also was just wondering
I know it seems like every other question is on this subject but.
I saw from an earlier message the following statement from Dr. DeLano
PyMOL's fitting abilities are improving: the upcoming version (v0.80)
will have the ability to do an on-the-fly sequence-alignment followed by
an optimized
the ability to 'clip' to an object or manipulate the
'world' (meaning all objects).
Just wondering and eagerly anticipating the new version!
Michael Ford
This list really needs a reflector (ala AMBER mail reflector) so that we
can benefit from each others pains. It would really be in everyone's
best interest. (less repetition of answers, less asking of questions
already answered!)
Just my humble opinion,
(yes I realize there are other things to w
I know there has been some work done on using AMBER trajectories with PyMol.
Any pointers???
Mike Ford
pymol-users-requ...@lists.sourceforge.net wrote:
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I really like this program (trying to wean myself from InsightII), but I'm
still working a few things out:
When I color objects, they seem to get a colored, but it is 'hidden' by the
cpk coloring initially assigned. I've tried several things, but no luck.
Mike Ford
pymol-users-requ...@lists.s
How do I measure angles and distances in pymol???
Michael Ford
pymol-users-requ...@lists.sourceforge.net wrote:
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> pymol-users@lists.sourceforge.net
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