[PyMOL] Getting started with movies for moving through a presentation

2002-10-31 Thread Kersey Black
Hi Pymolers, Sorry for a newbie question, but here goes. I am trying to get started with movies and am having problems with the understanding the paradigm (states vs frames and how actions are associated with frames, etc). So, a couple of questions arise. 1) Perhaps I misunderstanding the

[PyMOL] How to get a suurface on small molecule in active site?

2002-10-30 Thread Kersey Black
Hi Pymolers, I am trying to show a surface on a small molecule in the active site. I can create surfaces on protein residues without any problem, but I can not get a surface around the small organic structure. I have tried this on an SGI and using the 0.84beta on OS X. I am obviously missi

[PyMOL] Re: Screen problem - G3 Powerbook - external display [Mac OS X 10.2.1]

2002-10-29 Thread Kersey Black
let you know if that changes. Thanks again Cheers, Kersey Kersey BlackJoint Science Program Professor of Chemistry Claremont Colleges

[PyMOL] Screen problems Mac OS X 10.2.1

2002-10-24 Thread Kersey Black
Hi, Just installed PyMOL 0.84beta -- looks great. Hoping to use it instead of Molscript on the SGI. However, the image on the screen is screwed up -- looks like it has the wrong color map, mixed in with some bad dithering. The background is dark green. When I click to move the structure, o