[PyMOL] commandline without libGL

2011-07-29 Thread Christian Seifert
ot want to see any GUI... ^^ I tried pymol -c, but this results in the following error: pymol.exe: error while loading shared libraries: libGL.so.1: cannot open shared object file: No such file or directory Greets, Christian -- Christian Seifert, M.Sc. HPC Administrator Department of

Re: [PyMOL] System freezes in cause of memory abuse

2008-10-14 Thread Christian Seifert
> In the current open-source build (and future builds 1.2+), you can also > > set defer_builds_mode, 5 > > to obtain VMD-like playback speed for lines, spheres, and nonbonded > representations (immediate mode rendering -- geometry never touches RAM). > > Cheers, &

[PyMOL] System freezes in cause of memory abuse

2008-10-12 Thread Christian Seifert
ed by pymol? The "nice" command did not work, because it just reduces the available CPU time for pymol and not the available memory. Greetings Christian. -- M. Sc. Christian Seifert Department of Biophysics University of Bochum ND 04/67 44780 Bochum Germany Tel: +49 (0)234 32 28363 Fax

[PyMOL] Launch parameter "-d" with string

2008-09-10 Thread Christian Seifert
ions") pymol executes the command "help" and then tries to open a file named "selections". I tried using apostrophes in the shell, but I did not find a solution. Is there any possibility to start pymol with a string which contains whitespaces (e.g. $ pymol -d "help selection

Re: [PyMOL] segmentation fault after switching mainwindow between visualisation and commandline

2006-11-21 Thread Christian Seifert
the problems. Cheers Martin segmentation fault after switching mainwindow between visualisation and commandline From: Christian Seifert - 2006-11-13 02:07 Hi, I found a critical and reproducible bug using the 0.99rc6-binarys on my machine. Stepps

[PyMOL] segmentation fault after switching mainwindow between visualisation and commandline

2006-11-13 Thread Christian Seifert
Found 1 symmetry operators. > CmdLoad: "/home/cseifert/Desktop/1K5D.pdb" loaded as "1K5D". >./pymol: line 14: 7110 Speicherzugriffsfehler $PYMOL_PATH/pymol.exe "$@" Thanks, Christian Seifert.