Hi, Jarrett
This is more than helpful! I just need to fix my own mistake in the selection
cmd.select(base_interface, "byres((not (/base//H+L) & base) within 10 of
/base//H+L)")
Maybe one more question:
Selection: “not (/base//H+L)” returns all residues in pred, as well as the P
chain of base.
Hi,
There might be a cleaner way to do this, but I propose creating a mapping
of your chains from base to pred and use the `iterate` command to get the
relevant identifiers and map them back to the prediction. Here is a full
script that pulls from the PDB that attempts this idea.
from pymol impor
