Hi Warren,
What commands did you use? I just tested the following on PyMOL
v1.5.0.4 and everything worked as advertised:
fetch 1rx1, async=0
fetch 1rx1, type=2fofc, async=0
isosurface mySurf, 1rx1_2fofc, 1.0, (organic)
orient organic
set transparency, 0.5
ray
Can you try the above code and let m
Hi,
I have generated isopotential surfaces for a protein that completely
enclose the basic structure using the APBS plugin.
I can increase the transparency so I can visualize an underlying
cartoon representation of the structure.
However, when I do a ray tracing to get
Dear all,
we have with our system Ubuntu a problem with APBS in the new pymol 1.5.
We use exactyl this version:
This Executable Build integrates and extends Open-Source PyMOL 1.5.0.4.
The following error occurs:
PDB2PQR - a Python-based structural conversion utility
--
Pl
