I'm writing a manuscript and just need clarification.
Does "cmd.iterate('all and n. ca', 'stored.stored_ss.append([ss])')"
use pymol's DSS to assign secondary structure? If not, how is this
command assigning secondary structure?
Thanks,
Bradley
On Tue, Jun 22, 2010 at 7:37 PM, Jason Vertrees
w
Hi Bradley,
> Does "cmd.iterate('all and n. ca', 'stored.stored_ss.append([ss])')"
'ss' in this usage just reads from the current model of the molecule
in memory. PyMOL can read secondary structure from the PDB files if
it's present or determine it by itself using dss. PyMOL defaults to
the for
