Hi,everybody:
Is there someway so that I can generate several asymmetry molecules from
one asymmetry unit in pymol?
Thank you.
Xiaofeng
_
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Dan,
That's the not expected result, but indeed you have a problem --
each of those subunits will have identical atoms. To resolve this, assign a
unique segment identifier to each subunit:
load 1c8e.pdb1, 1c8e
split_states 1c8e
delete 1c8e
alter all, segi = model[-4:]
rewind
save test.pd
Is there an easy way to delete all atoms that fall outside of the unit
cell after doing a symexp?
I'm doing it by hand which takes too long and is error prone...
Thanks in advance.
Hi all,
I opened a "biological unit" pdb file of a viral capsid protein
containing the 60 "states" or "models" making up the whole viral capsid
structure.
I did
split_states
to get all 60 molecules as individual objects
sweet!
then I deleted the ones I didnt want, leaving 15 molecules aroun
Yes, i've had the same problem too.
Jules
On Mon, 5 Apr 2004, Tom Lee wrote:
> I have trouble installing PyMOL using pymol-0_95-bin-win32-py23.zip. Here
> is the message I got.
>
> The installer is unable to locate Python. Python must be installed before
> PyMOL. Do you wish to abort?
>
> I h
Warren,
Exactly what I needed!
cheers
Dan
On 5 Apr 2004, at 23:08, pymol-users-requ...@lists.sourceforge.net
wrote:
Message: 10
From: "Warren DeLano"
To: "'Todd Geders'" ,
"'Ann Mullin'"
Cc:
Subject: RE: [PyMOL] biological unit question
Date: Mon, 5 Apr 2004 13:07:13 -0700
Tod
