[PyMOL] Re: PyMOL-users digest, Vol 1 #354 - 3 msgs

2003-07-03 Thread wgscott
When I installed X-windows pymol 0.90 on OS X using fink and try to run it, I get an error /sw/bin/python: can't open file '/Users/delwarl/pymol/modules/pymol/__init__.py' another user reported a different such error: /sw/lib/pymol/modules/pymol/__init__.py:300: RuntimeWarning: Python C API

RE: [PyMOL] stereo parameters?

2003-07-03 Thread Warren L. DeLano
Dirk, stereo_angle is the amount of "toe-in" stereo_shift is the horizontal displacement of the camera Initially, stereo_angle=2.1 and stereo_shift=2.0 Generally, you don't need to adjust stereo_angle very much. Stereo_shift is what you want to focus on. Try increasing it by 1 or 2. For

[PyMOL] stereo parameters?

2003-07-03 Thread Dirk Kostrewa
Dear PyMol users, my subjective stereo impression with pymol in window stereo mode is too "flat", both on SGI and on Linux, at least when I compare it with my ~10 years or so experience using other applications. I started to fiddle around with the stereo parameters "stereo_angle" and "stereo_sh

[PyMOL] external gui fails to show up (mac os x)

2003-07-03 Thread Wataru Kagawa
I have installed the X-windows version of pymol (ver. 0.9) in mac. The installation appeared fine, but when I started pymol, I saw the following lines in the terminal with no external gui. I appreciate for any suggestions. /sw/lib/pymol/modules/pymol/__init__.py:300: RuntimeWarning: Python